Homo sapiens

Gene : TRAV13-1 - ENSG00000211788 - Homo sapiens (human)

General information

Gene identifier

ENSG00000211788

Name

TRAV13-1

Description

T cell receptor alpha variable 13-1 [Source:HGNC Symbol;Acc:HGNC:12108]

Synonym(s)

Orthologs

Paralogs

Expression

80%

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0004533left testis16.060.199See source data
RSCAIE
UBERON:0018303adrenal tissue18.251See source data
RSCAIE
UBERON:0001199mucosa of stomach18.291See source data
RSCAIE
UBERON:0002098apex of heart20.281See source data
RSCAIE
UBERON:0010533metanephros cortex22.500.119See source data
RSCAIE
UBERON:0002336corpus callosum26.051See source data
RSCAIE
CL:0002255stromal cell of endometrium29.871See source data
RSCAIE
UBERON:0015488sural nerve30.931See source data
RSCAIE
UBERON:0002436primary visual cortex32.061See source data
RSCAIE
UBERON:0007023adult organism35.280.984See source data
RSCAIE
UBERON:0004023ganglionic eminence35.491See source data
RSCAIE
UBERON:0005343cortical plate36.471See source data
RSCAIE
UBERON:0003053ventricular zone36.481See source data
RSCAIE
UBERON:0000397colonic epithelium37.201See source data
RSCAIE
UBERON:0001987placenta38.040.294See source data
RSCAIE
CL:0000019sperm38.320.987See source data
RSCAIE
UBERON:0001782pigmented layer of retina38.550.997See source data
RSCAIE
UBERON:0002771middle temporal gyrus38.720.975See source data
RSCAIE
UBERON:0004360cauda epididymis38.740.994See source data
RSCAIE
UBERON:0004358caput epididymis38.750.98See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Homininae

3 species

Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Compare expression
Catarrhini

5 species

Macaca mulatta (macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Compare expression
Simiiformes

6 species

Callithrix jacchus (White-tufted-ear marmoset)
Macaca mulatta (macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Compare expression
Euarchontoglires

9 species

Mus musculus (mouse)






Oryctolagus cuniculus (rabbit)


Callithrix jacchus (White-tufted-ear marmoset)
Macaca mulatta (macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Rattus norvegicus (rat)

Compare expression
Boreoeutheria

11 species

Mus musculus (mouse)






Felis catus (cat)


Ovis aries (Sheep)


Oryctolagus cuniculus (rabbit)


Callithrix jacchus (White-tufted-ear marmoset)
Macaca mulatta (macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Rattus norvegicus (rat)

Compare expression
Orthology information comes from OMA : ENSG00000211788.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Simiiformes

1 gene

Compare expression
Boreoeutheria

2 genes

Compare expression
Paralogy information comes from OMA : ENSG00000211788.

Cross-references

Ensembl

ENSG00000211788 (TRAV13-1)

HGNC

HGNC:12108 (TRAV13-1)

UniProtKB/Swiss-Prot