Gene : LINC00485 - ENSG00000258169 - Homo sapiens (human)
General information
Gene identifier
ENSG00000258169
Name
LINC00485
Description
long intergenic non-protein coding RNA 485 [Source:HGNC Symbol;Acc:HGNC:27476]
Organism
Synonym(s)
Expression
Show
entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| UBERON:0035827right adrenal gland cortex | 49.02 | 1.12e-4 | See source data | |
| CL:0000576monocyte | 48.41 | 0.038 | See source data | |
| UBERON:0002118right ovary | 46.92 | 0.003 | See source data | |
| UBERON:0001234left adrenal gland | 46.84 | 2.06e-5 | See source data | |
| UBERON:0035841esophagogastric junction muscularis propria | 46.75 | 7.75e-4 | See source data | |
| UBERON:0035825left adrenal gland cortex | 46.51 | 0.002 | See source data | |
| UBERON:0001135smooth muscle tissue | 45.21 | 0.023 | See source data | |
| UBERON:0001830minor salivary gland | 44.65 | 0.002 | See source data | |
| UBERON:0007610tibial artery | 43.16 | 0.029 | See source data | |
| UBERON:0001496ascending aorta | 43.15 | 0.007 | See source data | |
| UBERON:0001323tibial nerve | 42.67 | 0.008 | See source data | |
| UBERON:0003697abdominal wall | 42.34 | 0.027 | See source data | |
| UBERON:0003454small intestine Peyer's patch | 42.32 | 0.012 | See source data | |
| UBERON:0010414omental fat pad | 42.31 | 0.023 | See source data | |
| UBERON:0001416skin of abdomen | 41.95 | 0.019 | See source data | |
| UBERON:0001898hypothalamus | 40.89 | 0.027 | See source data | |
| UBERON:0000007pituitary gland | 40.48 | 0.011 | See source data | |
| UBERON:0001157transverse colon | 39.45 | 0.022 | See source data | |
| UBERON:0001626left coronary artery | 38.23 | 0.032 | See source data | |
| UBERON:0001120left lobe of thyroid gland | 37.72 | 0.04 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Sources of annotations to anatomy and development:
Sources of raw data:
- Affymetrix data: ArrayExpress, GEO
- single-cell RNA-Seq data: SRA
- RNA-Seq data: GEO, GTEx - dbGAP, SRA
Reported absence of expression
Show
entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| UBERON:0001554skin of hip | 28.95 | 0.1 | See source data | |
| UBERON:0004262upper leg skin | 34.50 | 0.1 | See source data | |
| CL:0002336buccal mucosa cell | 34.85 | 0.836 | See source data | |
| UBERON:0007023adult organism | 35.28 | 0.998 | See source data | |
| UBERON:0006483Brodmann (1909) area 46 | 37.40 | 0.975 | See source data | |
| CL:0000019sperm | 38.32 | 0.998 | See source data | |
| UBERON:0001782pigmented layer of retina | 38.55 | 0.99 | See source data | |
| UBERON:0000997mammalian vulva | 38.66 | 0.995 | See source data | |
| UBERON:0002771middle temporal gyrus | 38.72 | 0.992 | See source data | |
| UBERON:0004360cauda epididymis | 38.74 | 0.997 | See source data | |
| UBERON:0004358caput epididymis | 38.75 | 0.992 | See source data | |
| UBERON:0000998seminal vesicle | 38.75 | 0.998 | See source data | |
| UBERON:0002476lateral globus pallidus | 38.81 | 0.733 | See source data | |
| UBERON:0000979tibia | 38.93 | 0.996 | See source data | |
| UBERON:0004359corpus epididymis | 38.98 | 0.962 | See source data | |
| UBERON:0002736lateral nuclear group of thalamus | 39.00 | 0.975 | See source data | |
| UBERON:0005384nasal cavity epithelium | 39.04 | 0.998 | See source data | |
| UBERON:0002728entorhinal cortex | 39.05 | 0.998 | See source data | |
| UBERON:0001954Ammon's horn | 39.09 | 0.998 | See source data | |
| UBERON:0001255urinary bladder | 39.09 | 0.998 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Sources of raw data:
- Affymetrix data: ArrayExpress, GEO
- RNA-Seq data: GEO, GTEx - dbGAP, SRA
Cross-references
Ensembl
HGNC
GeneCards