Gene : PCDHGA9 - ENSG00000261934 - Homo sapiens (human)
General information
Gene identifier
ENSG00000261934
Name
PCDHGA9
Description
protocadherin gamma subfamily A, 9 [Source:HGNC Symbol;Acc:HGNC:8707]
Organism
Synonym(s)
Orthologs
Paralogs
Expression
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entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| CL:0002255stromal cell of endometrium | 80.45 | 5.48e-11 | See source data | |
| UBERON:0005343cortical plate | 80.33 | 1.49e-9 | See source data | |
| UBERON:0004023ganglionic eminence | 78.39 | 2.62e-10 | See source data | |
| UBERON:0003701calcaneal tendon | 73.36 | 1.56e-5 | See source data | |
| UBERON:0000451prefrontal cortex | 73.02 | 9.29e-10 | See source data | |
| UBERON:0003053ventricular zone | 71.97 | 1.96e-7 | See source data | |
| UBERON:0009835anterior cingulate cortex | 68.75 | 1.82e-7 | See source data | |
| UBERON:0001876amygdala | 68.36 | 5.34e-8 | See source data | |
| UBERON:0001135smooth muscle tissue | 68.30 | 2.11e-10 | See source data | |
| UBERON:0002129cerebellar cortex | 68.18 | 8.39e-6 | See source data | |
| UBERON:0002245cerebellar hemisphere | 68.13 | 7.99e-6 | See source data | |
| UBERON:0002345descending thoracic aorta | 67.91 | 1.95e-7 | See source data | |
| UBERON:0001873caudate nucleus | 67.58 | 1.90e-7 | See source data | |
| UBERON:0014890right hemisphere of cerebellum | 67.55 | 1.24e-5 | See source data | |
| UBERON:0002110gall bladder | 67.42 | 6.45e-9 | See source data | |
| UBERON:0001882nucleus accumbens | 66.88 | 3.22e-7 | See source data | |
| UBERON:0013540Brodmann (1909) area 9 | 66.80 | 7.21e-7 | See source data | |
| UBERON:0002167right lung | 66.78 | 1.48e-6 | See source data | |
| UBERON:0009853body of uterus | 66.65 | 8.54e-8 | See source data | |
| UBERON:0001496ascending aorta | 66.65 | 3.10e-7 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Sources of annotations to anatomy and development:
Sources of raw data:
- Affymetrix data: ArrayExpress, GEO
- single-cell RNA-Seq data: SRA
- RNA-Seq data: GEO, GTEx - dbGAP, SRA
Reported absence of expression
Show
entries
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Sources of raw data:
- Affymetrix data: ArrayExpress, GEO
- RNA-Seq data: GEO, GTEx - dbGAP, SRA
Orthologs
Taxon Name | Species with orthologs | Gene(s) | Expression comparison | See details |
|---|---|---|---|---|
| Homininae | 1 species | 1 gene | Compare expression | |
| Euarchontoglires | 2 species | 2 genes | Compare expression | |
| Amniota | 4 species | 26 genes | Compare expression |
Paralogs (same species)
Taxon Name | Gene(s) | Expression comparison | See details |
|---|---|---|---|
| Mammalia | 11 genes | Compare expression | |
| Vertebrata | 48 genes | Compare expression |
Cross-references
CCDS
Ensembl
HGNC
EMBL
GeneCards
UniProtKB/Swiss-Prot