Mus musculus

Gene : Vamp2 - ENSMUSG00000020894 - Mus musculus (mouse)

General information

Gene identifier

ENSMUSG00000020894

Name

Vamp2

Description

vesicle-associated membrane protein 2 [Source:MGI Symbol;Acc:MGI:1313277]

Synonym(s)

syb2,sybii,synaptobrevin ii,synaptobrevin-2,syb-2

Orthologs

Paralogs

Expression

80%

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0008947respiratory primordium43.170.227See source data
RSCAIE
UBERON:0006852glomerular visceral epithelium49.990.5See source data
RSCAIE
UBERON:0001917endothelium of artery50.000.5See source data
RSCAIE
UBERON:0005750glomerular parietal epithelium50.000.5See source data
RSCAIE
UBERON:0002111artery smooth muscle tissue50.000.5See source data
RSCAIE
UBERON:0001919endothelium of vein50.000.5See source data
RSCAIE
UBERON:0001964least splanchnic nerve50.000.5See source data
RSCAIE
UBERON:0006517kidney calyx51.430.5See source data
RSCAIE
CL:0000655secondary oocyte53.060.156See source data
RSCAIE
CL:0000365animal zygote53.900.101See source data
RSCAIE
CL:0000510paneth cell54.010.11See source data
RSCAIE
UBERON:0001756middle ear54.710.5See source data
RSCAIE
UBERON:0004737metanephric collecting duct55.210.123See source data
RSCAIE
UBERON:0001140renal vein55.550.5See source data
RSCAIE
UBERON:0001737larynx56.420.5See source data
RSCAIE
UBERON:0005130metanephric loop of Henle56.430.186See source data
RSCAIE
UBERON:0005562thymus primordium56.720.5See source data
RSCAIE
UBERON:0004639renal afferent arteriole57.140.5See source data
RSCAIE
UBERON:0005147metanephric renal vesicle58.030.164See source data
RSCAIE
UBERON:0004640renal efferent arteriole58.330.5See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

  • Affymetrix data: Bgee
  • in situ hybridization data: MGI
  • RNA-Seq data: Bgee

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Murinae

1 species

1 gene

Compare expression
Rodentia

2 species

Compare expression
Glires

3 species

Compare expression
Euarchontoglires

14 species

Homo sapiens (human)

Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)

Rattus norvegicus (rat)
Compare expression
Mammalia

15 species

Homo sapiens (human)

Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)

Rattus norvegicus (rat)
Compare expression
Amniota

18 species

Homo sapiens (human)

Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)

Rattus norvegicus (rat)
Anolis carolinensis (green anole)
Compare expression
Sarcopterygii

19 species

Homo sapiens (human)

Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)

Rattus norvegicus (rat)
Anolis carolinensis (green anole)
Latimeria chalumnae (Coelacanth)
Compare expression
Orthology information comes from OMA : ENSMUSG00000020894.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
MetazoaCompare expression
Paralogy information comes from OMA : ENSMUSG00000020894.

Cross-references

CCDS

CCDS24881 (CCDS24881.1)

Ensembl

MGI

MGI:1313277 (Vamp2)

UniProtKB/Swiss-Prot

UniProtKB/TrEMBL