Search Genes

Gene : col1a1b - ENSSMAG00000008146 - Scophthalmus maximus (Turbot)

General information

Expressed in muscle tissue and 6 other cell types or tissues.

Gene identifier

ENSSMAG00000008146

Name

col1a1b

Description

collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]

Organism

Scophthalmus maximus (Turbot)

Synonym(s)

Orthologs

14 orthologs

Paralogs

179 paralogs

Source data

Retrieve all processed expression values for that gene

Expression graph

80%

Expression table

80%

Reported absence of expression

80%

Orthologs

Filter:

Taxon Name	Species with orthologs	Gene(s)	Expression comparison
Percomorphaceae	6 species Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	6 genes ENSPREG00000010085 col1a1b ENSORLG00000011273 col1a1b ENSACLG00000026412 col1a1b ENSNBRG00000006458 col1a1b ENSGACG00000003361 col1a1b ENSNFUG00015024901 col1a1b	Compare expression
Acanthomorphata	7 species Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	7 genes ENSGMOG00000015290 col1a1b ENSPREG00000010085 col1a1b ENSORLG00000011273 col1a1b ENSACLG00000026412 col1a1b ENSNBRG00000006458 col1a1b ENSGACG00000003361 col1a1b ENSNFUG00015024901 col1a1b	Compare expression
Euteleosteomorpha	9 species Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	10 genes ENSELUG00000015762 col1a1b ENSSSAG00000005527 COL1A1 ENSSSAG00000069947 col1a1b ENSGMOG00000015290 col1a1b ENSPREG00000010085 col1a1b ENSORLG00000011273 col1a1b ENSACLG00000026412 col1a1b ENSNBRG00000006458 col1a1b ENSGACG00000003361 col1a1b ENSNFUG00015024901 col1a1b	Compare expression
Clupeocephala	11 species Danio rerio (zebrafish) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	12 genes ENSDARG00000035809 col1a1b ENSAMXG00000002892 col1a1b ENSELUG00000015762 col1a1b ENSSSAG00000005527 COL1A1 ENSSSAG00000069947 col1a1b ENSGMOG00000015290 col1a1b ENSPREG00000010085 col1a1b ENSORLG00000011273 col1a1b ENSACLG00000026412 col1a1b ENSNBRG00000006458 col1a1b ENSGACG00000003361 col1a1b ENSNFUG00015024901 col1a1b	Compare expression
Teleostei	12 species Danio rerio (zebrafish) Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	13 genes ENSDARG00000035809 col1a1b 118220696 col1a1b ENSAMXG00000002892 col1a1b ENSELUG00000015762 col1a1b ENSSSAG00000005527 COL1A1 ENSSSAG00000069947 col1a1b ENSGMOG00000015290 col1a1b ENSPREG00000010085 col1a1b ENSORLG00000011273 col1a1b ENSACLG00000026412 col1a1b ENSNBRG00000006458 col1a1b ENSGACG00000003361 col1a1b ENSNFUG00015024901 col1a1b	Compare expression
Chordata	13 species Danio rerio (zebrafish) Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Branchiostoma lanceolatum (Common lancelet)	14 genes ENSDARG00000035809 col1a1b 118220696 col1a1b ENSAMXG00000002892 col1a1b ENSELUG00000015762 col1a1b ENSSSAG00000005527 COL1A1 ENSSSAG00000069947 col1a1b ENSGMOG00000015290 col1a1b ENSPREG00000010085 col1a1b ENSORLG00000011273 col1a1b ENSACLG00000026412 col1a1b ENSNBRG00000006458 col1a1b ENSGACG00000003361 col1a1b ENSNFUG00015024901 col1a1b BL01498 COL1A2	Compare expression

Showing 1 to 6 of 6 entries

Orthology information comes from OMA : ENSSMAG00000008146.

Paralogs (same species)

Filter:

Taxon Name	Gene(s)	Expression comparison
Gnathostomata	2 genes ENSSMAG00000000707 col2a1a ENSSMAG00000017480 col1a1a	Compare expression: table \| graph
Vertebrata	4 genes ENSSMAG00000000707 col2a1a ENSSMAG00000013036 COL2A1 ENSSMAG00000013511 col1a2 ENSSMAG00000017480 col1a1a	Compare expression: table \| graph
Chordata	5 genes ENSSMAG00000000707 col2a1a ENSSMAG00000002910 col5a2a ENSSMAG00000013036 COL2A1 ENSSMAG00000013511 col1a2 ENSSMAG00000017480 col1a1a	Compare expression: table \| graph
Opisthokonta	179 genes ENSSMAG00000000101 ankrd28b ENSSMAG00000000151 waslb ENSSMAG00000000276 ppp1r7 ENSSMAG00000000387 SRSF3 ENSSMAG00000000477 mns1 ENSSMAG00000000488 plk3 ENSSMAG00000000490 cdk10 ENSSMAG00000000493 mns1 ENSSMAG00000000544 PLK1 ENSSMAG00000000707 col2a1a ENSSMAG00000000772 smc1b ENSSMAG00000001016 lpp ENSSMAG00000001149 ENSSMAG00000001267 shoc2 ENSSMAG00000001520 plk2b ENSSMAG00000001612 rad23aa ENSSMAG00000002013 smc1al ENSSMAG00000002064 wasla ENSSMAG00000002139 kctd9a ENSSMAG00000002194 ankrd39 ENSSMAG00000002412 cirbpb ENSSMAG00000002729 rps6ka2 ENSSMAG00000002910 col5a2a ENSSMAG00000002949 cog6 ENSSMAG00000003311 morn4 ENSSMAG00000003342 kri1 ENSSMAG00000003397 mapk9 ENSSMAG00000003584 cfap45 ENSSMAG00000003599 STK35 ENSSMAG00000003724 cfdp1 ENSSMAG00000003761 itgbl1 ENSSMAG00000003885 rbm28 ENSSMAG00000003917 ENSSMAG00000003969 cdk4 ENSSMAG00000004170 sass6 ENSSMAG00000004198 ENSSMAG00000004227 cdk2 ENSSMAG00000004251 MAPK8 ENSSMAG00000004392 fam184a ENSSMAG00000004411 ENSSMAG00000004566 sf3b6 ENSSMAG00000004641 hnrnpa1a ENSSMAG00000004671 elavl3 ENSSMAG00000004684 ANKRD52 ENSSMAG00000004817 echs1 ENSSMAG00000004915 ENSSMAG00000005099 ENSSMAG00000005335 RAD23B ENSSMAG00000005367 ENSSMAG00000005641 mapk8b ENSSMAG00000005652 lrrc40 ENSSMAG00000005656 ints6 ENSSMAG00000005661 zgc:171775 ENSSMAG00000005755 si:ch211-220i18.4 ENSSMAG00000005817 dyrk3 ENSSMAG00000006029 mfap1 ENSSMAG00000006078 ENSSMAG00000006152 prc1b ENSSMAG00000006452 nek4 ENSSMAG00000006585 ENKD1 ENSSMAG00000006620 mapk10 ENSSMAG00000006837 sf3b4 ENSSMAG00000006848 tln2a ENSSMAG00000006862 cdk9 ENSSMAG00000006881 elavl4 ENSSMAG00000006937 srpk1b ENSSMAG00000006989 mapk14b ENSSMAG00000007027 ENSSMAG00000007696 mapk13 ENSSMAG00000007824 sel1l ENSSMAG00000008291 cdk11b ENSSMAG00000008832 ECHDC3 ENSSMAG00000008925 celf2 ENSSMAG00000008985 ENSSMAG00000008999 gsk3ab ENSSMAG00000009283 alyref ENSSMAG00000009386 kctd9b ENSSMAG00000009503 fbxl20 ENSSMAG00000009704 mapk3 ENSSMAG00000009979 rps6ka3a ENSSMAG00000010408 cdk7 ENSSMAG00000010521 fbxl2 ENSSMAG00000010614 tra2b ENSSMAG00000010745 elavl2 ENSSMAG00000010835 ENSSMAG00000010899 srsf5a ENSSMAG00000010951 eci2 ENSSMAG00000010964 tln1 ENSSMAG00000011169 alyref ENSSMAG00000011226 prpf40a ENSSMAG00000011257 luc7l3 ENSSMAG00000011277 cdkl1 ENSSMAG00000011347 tia1 ENSSMAG00000011445 rps6kal ENSSMAG00000011819 ENSSMAG00000011946 mapk12b ENSSMAG00000011965 luc7l ENSSMAG00000012001 mapk11 ENSSMAG00000012260 zgc:85722 ENSSMAG00000012325 prc1a ENSSMAG00000012383 ints6l ENSSMAG00000012671 tial1 ENSSMAG00000012744 SRPK3 ENSSMAG00000012879 wasa ENSSMAG00000012923 ENSSMAG00000012930 slirp ENSSMAG00000013001 stk16 ENSSMAG00000013036 COL2A1 ENSSMAG00000013100 cux1b ENSSMAG00000013107 cdk6 ENSSMAG00000013188 PAK3 ENSSMAG00000013235 cnot3a ENSSMAG00000013258 syvn1 ENSSMAG00000013287 ENSSMAG00000013444 fip1l1b ENSSMAG00000013511 col1a2 ENSSMAG00000013797 ccdc173 ENSSMAG00000013808 ccdc173 ENSSMAG00000013827 celf1 ENSSMAG00000013867 ankrd44 ENSSMAG00000013905 zgc:158803 ENSSMAG00000014169 mapk1 ENSSMAG00000014242 tra2a ENSSMAG00000014316 cdk8 ENSSMAG00000014343 cdk20 ENSSMAG00000014353 elavl1a ENSSMAG00000014763 elavl1a ENSSMAG00000014783 SRPK3 ENSSMAG00000014819 srsf6a ENSSMAG00000014831 pak2a ENSSMAG00000014941 limk2 ENSSMAG00000014954 CIR1 ENSSMAG00000015218 hnrnpa3 ENSSMAG00000015263 txlng ENSSMAG00000016031 cnot3b ENSSMAG00000016229 tln2b ENSSMAG00000016369 pak2b ENSSMAG00000016397 txk ENSSMAG00000016758 limk1a ENSSMAG00000016795 arglu1a ENSSMAG00000016933 rnps1 ENSSMAG00000017447 srsf6b ENSSMAG00000017480 col1a1a ENSSMAG00000017558 cdk19 ENSSMAG00000017702 TRA2B ENSSMAG00000017795 gsk3aa ENSSMAG00000017937 nfxl1 ENSSMAG00000018300 cdk1 ENSSMAG00000018308 dek ENSSMAG00000018406 gsk3ba ENSSMAG00000018467 ENSSMAG00000018579 ENSSMAG00000018718 sfswap ENSSMAG00000018781 ENSSMAG00000018840 tcerg1a ENSSMAG00000018965 cwf19l2 ENSSMAG00000019009 cdk5 ENSSMAG00000019129 dnajc9 ENSSMAG00000019262 MOK ENSSMAG00000019272 srpk1a ENSSMAG00000019276 mapk14a ENSSMAG00000019286 srsf7a ENSSMAG00000019644 limk1b ENSSMAG00000019728 srsf5b ENSSMAG00000019757 rps6ka4 ENSSMAG00000019763 rps6ka1 ENSSMAG00000019781 morn2 ENSSMAG00000019865 si:ch211-257p13.3 ENSSMAG00000020032 ENSSMAG00000020230 ENSSMAG00000020362 ENSSMAG00000020499 pak1 ENSSMAG00000020536 CCDC146 ENSSMAG00000020629 alg6 ENSSMAG00000020812 srsf3a ENSSMAG00000020861 ankrd52a ENSSMAG00000021064 gas8 ENSSMAG00000021105 MORN4 ENSSMAG00000021241 ncl	Compare expression: table \| graph

Showing 1 to 4 of 4 entries

Paralogy information comes from OMA : ENSSMAG00000008146.

Cross-references

Ensembl

ENSSMAG00000008146 (col1a1b)

ZFIN

ZDB-GENE-030131-4400 (col1a1b)