Salmo salar

Gene : LOC106592537 - ENSSSAG00000025996 - Salmo salar (Atlantic salmon)

General information

Gene identifier

ENSSSAG00000025996

Name

LOC106592537

Description

zymogen granule membrane protein 16-like [Source:NCBI gene;Acc:106592537]

Synonym(s)

ENSSSAT00000040362,ENSSSAP00000025746

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000206pharyngeal gill99.64<= 1.00e-14See source data
RSCAIE
UBERON:0009120gill filament99.34<= 1.00e-14See source data
RSCAIE
UBERON:0000004nose94.733.54e-14See source data
RSCAIE
UBERON:0005870olfactory pit93.475.66e-14See source data
RSCAIE
UBERON:0007021sexually immature organism92.00<= 1.00e-14See source data
RSCAIE
UBERON:0000014zone of skin89.482.53e-10See source data
RSCAIE
UBERON:0000970eye77.341.53e-7See source data
RSCAIE
UBERON:0000019camera-type eye76.606.00e-5See source data
RSCAIE
UBERON:0002328notochord48.200.001See source data
RSCAIE
UBERON:2005272immature gonad35.360.001See source data
RSCAIE
UBERON:4300174actinopterygian pyloric caecum31.580.003See source data
RSCAIE
UBERON:0002385muscle tissue30.492.03e-8See source data
RSCAIE
UBERON:0007132head kidney22.510.019See source data
RSCAIE
UBERON:0002107liver20.600.007See source data
RSCAIE
UBERON:0006866terminal part of digestive tract14.900.038See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000948heart10.211See source data
RSCAIE
UBERON:0000955brain13.100.756See source data
RSCAIE
UBERON:0000007pituitary gland14.591See source data
RSCAIE
UBERON:0002116ileum14.851See source data
RSCAIE
UBERON:0001046hindgut17.581See source data
RSCAIE
UBERON:0000473testis18.590.903See source data
RSCAIE
UBERON:0002106spleen19.080.241See source data
RSCAIE
UBERON:0001045midgut19.190.959See source data
RSCAIE
UBERON:0001968semen23.450.803See source data
RSCAIE
UBERON:0000080mesonephros30.060.198See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Euteleosteomorpha

5 species

Gadus morhua (Atlantic cod)

Poecilia reticulata (Guppy)


Oryzias latipes (Japanese rice fish)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Compare expression
Teleostei

6 species

Anguilla anguilla (European freshwater eel)


Gadus morhua (Atlantic cod)

Poecilia reticulata (Guppy)


Oryzias latipes (Japanese rice fish)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Compare expression
Euteleostomi

31 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Capra hircus (Goat)
Ovis aries (Sheep)

Oryctolagus cuniculus (rabbit)









Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)



Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)

Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)

Rattus norvegicus (rat)
Monodelphis domestica (opossum)


Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)

Anguilla anguilla (European freshwater eel)


Gadus morhua (Atlantic cod)

Poecilia reticulata (Guppy)


Oryzias latipes (Japanese rice fish)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)

54 genes

Compare expression
Orthology information comes from OMA : ENSSSAG00000025996.

Paralogs (same species)

Paralogy information comes from OMA : ENSSSAG00000025996.