Caenorhabditis elegans

Gene : nhr-172 - WBGene00016927 - Caenorhabditis elegans (nematode)

General information

Gene identifier

WBGene00016927

Name

nhr-172

Description

Nuclear Hormone Receptor family [Source:UniProtKB/TrEMBL;Acc:O16442]

Synonym(s)

Expression graph

nhr-172nhr-172[-]anatomical entity[+]musculature[+]multicellular organism[+]digestive systemExpression score020406080100Not expressedNo data
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Expression table

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entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000922embryo47.920.003See source data
RSCAIE
UBERON:0000467anatomical system43.880.022See source data
RSCAIE
WBbt:0005451pharyngeal muscle cell (C elegans)36.250.006See source data
RSCAIE
UBERON:0007023adult organism35.060.006See source data
RSCAIE
UBERON:0002548larva31.370.007See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
WBbt:0005784germ line (C elegans)50.530.923See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

  • Affymetrix data: GEO

Cross-references

Ensembl

WBGene00016927 (nhr-172)

UniProtKB/TrEMBL