Xenopus laevis

Gene : scd.L - 100037114 - Xenopus laevis (African clawed frog)

General information

Gene identifier

100037114

Name

scd.L

Description

uncharacterized LOC100037114

Synonym(s)

XELAEV_18034861mg,scd,LOC100037114

Orthologs

Paralogs

Expression

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entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000160intestine99.19<= 1.00e-14See source data
RSCAIE
UBERON:0000955brain97.626.23e-11See source data
RSCAIE
UBERON:0002107liver96.66<= 1.00e-14See source data
RSCAIE
UBERON:0000019camera-type eye95.901.26e-10See source data
RSCAIE
UBERON:0002048lung94.091.73e-9See source data
RSCAIE
UBERON:0001846internal ear92.472.04e-8See source data
RSCAIE
UBERON:0002113kidney91.588.00e-11See source data
RSCAIE
UBERON:0000473testis89.287.29e-10See source data
RSCAIE
UBERON:0000948heart87.151.80e-7See source data
RSCAIE
UBERON:0001264pancreas84.731.86e-8See source data
RSCAIE
UBERON:0000014zone of skin80.697.86e-7See source data
RSCAIE
UBERON:0002106spleen80.532.23e-6See source data
RSCAIE
UBERON:0002385muscle tissue80.212.25e-6See source data
RSCAIE
CL:0000025egg cell78.589.69e-8See source data
RSCAIE
UBERON:0000945stomach73.002.18e-6See source data
RSCAIE
UBERON:0000992ovary72.471.00e-9See source data
RSCAIE
UBERON:0000307blastula68.001.26e-6See source data
RSCAIE
CL:0000023oocyte67.961.76e-6See source data
RSCAIE
UBERON:0004734gastrula57.921.01e-4See source data
RSCAIE
UBERON:0004455neurula embryo43.170.009See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

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entries

No reported absence of expression for this gene

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Xenopus

1 species

Xenopus tropicalis (western clawed frog)
Compare expression
Tetrapoda

4 species

Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Compare expression
Sarcopterygii

5 species

Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Latimeria chalumnae (Coelacanth)
Compare expression
Euteleostomi

14 species

Danio rerio (zebrafish)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Anguilla anguilla (European freshwater eel)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Latimeria chalumnae (Coelacanth)
Compare expression
Chordata

15 species

Danio rerio (zebrafish)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Anguilla anguilla (European freshwater eel)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Branchiostoma lanceolatum (Common lancelet)


Latimeria chalumnae (Coelacanth)
Compare expression
Bilateria

19 species

Danio rerio (zebrafish)
Drosophila melanogaster (fruit fly)

Caenorhabditis elegans (nematode)


Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Anguilla anguilla (European freshwater eel)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Branchiostoma lanceolatum (Common lancelet)


Latimeria chalumnae (Coelacanth)
Drosophila pseudoobscura ()


Drosophila simulans ()

Compare expression

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Xenopus

1 gene

447633 scd.S
Compare expression