Manis javanica

Gene : LOC108393323 - 108393323 - Manis javanica (Malayan pangolin)

General information

Gene identifier

108393323

Name

LOC108393323

Description

Synonym(s)

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0001044saliva-secreting gland46.324.72e-4See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0002048lung0.011See source data
RSCAIE
UBERON:0002370thymus0.061See source data
RSCAIE
UBERON:0001869cerebral hemisphere3.080.701See source data
RSCAIE
UBERON:0002037cerebellum3.091See source data
RSCAIE
UBERON:0000082adult mammalian kidney3.181See source data
RSCAIE
UBERON:0002107liver3.201See source data
RSCAIE
UBERON:0002106spleen4.560.721See source data
RSCAIE
UBERON:0000948heart5.391See source data
RSCAIE
UBERON:0002108small intestine6.891See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Laurasiatheria

6 species

Compare expression
Boreoeutheria

18 species

Homo sapiens (human)
Mus musculus (mouse)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Compare expression
Mammalia

19 species

Homo sapiens (human)
Mus musculus (mouse)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Compare expression
Amniota

21 species

Homo sapiens (human)
Mus musculus (mouse)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Compare expression
Sarcopterygii

22 species

Homo sapiens (human)
Mus musculus (mouse)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Latimeria chalumnae (Coelacanth)

Compare expression

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Theria

1 gene

108393326 LOC108393326
Compare expression
Tetrapoda

3 genes

108393326 LOC108393326
108399570 LOC108399570
108399574 LOC108399574
Compare expression
Euteleostomi

5 genes

108393326 LOC108393326
108399570 LOC108399570
108399571 LOC108399571
108399574 LOC108399574
118969741 LOC118969741
Compare expression
Gnathostomata

8 genes

108393325 LOC108393325
108393326 LOC108393326
108399570 LOC108399570
108399571 LOC108399571
108399574 LOC108399574
108399575 LOC108399575
108408912 KRT25
118969741 LOC118969741
Compare expression

Cross-references

RefSeq

LOC108393323 (LOC108393323)