Anguilla anguilla

Gene : LOC118228896 - 118228896 - Anguilla anguilla (European freshwater eel)

General information

Gene identifier

118228896

Name

LOC118228896

Description

Synonym(s)

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000955brain90.565.88e-6See source data
RSCAIE
UBERON:0006860swim bladder75.271.30e-4See source data
RSCAIE
UBERON:0002107liver74.040.001See source data
RSCAIE
UBERON:0000080mesonephros58.660.023See source data
RSCAIE
UBERON:0001474bone element53.580.002See source data
RSCAIE
UBERON:0000948heart50.870.005See source data
RSCAIE
UBERON:0000473testis49.960.001See source data
RSCAIE
UBERON:0007021sexually immature organism48.800.001See source data
RSCAIE
UBERON:0000160intestine45.830.014See source data
RSCAIE
UBERON:0002385muscle tissue43.680.019See source data
RSCAIE
UBERON:0000206pharyngeal gill42.580.005See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000992ovary30.270.083See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Teleostei

8 species

Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Compare expression
Neopterygii

9 species

Lepisosteus oculatus (Spotted gar)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Compare expression
Euteleostomi

37 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Lepisosteus oculatus (Spotted gar)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Latimeria chalumnae (Coelacanth)

39 genes

Compare expression

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Teleostei

1 gene

118225581 homer3b
Compare expression
Metazoa

5 genes

118212857 LOC118212857
118215382 LOC118215382
118225581 homer3b
118226722 homer2
118237106 LOC118237106
Compare expression

Cross-references

RefSeq

LOC118228896 (LOC118228896)