Anguilla anguilla

Gene : stoml3b - 118236507 - Anguilla anguilla (European freshwater eel)

General information

Gene identifier

118236507

Name

stoml3b

Description

Synonym(s)

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000160intestine98.607.93e-10See source data
RSCAIE
UBERON:0007021sexually immature organism95.652.18e-9See source data
RSCAIE
UBERON:0000206pharyngeal gill59.035.62e-4See source data
RSCAIE
UBERON:0000473testis45.960.002See source data
RSCAIE
UBERON:0006860swim bladder43.260.01See source data
RSCAIE
UBERON:0002385muscle tissue39.120.033See source data
RSCAIE
UBERON:0000948heart37.550.035See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000955brain18.600.144See source data
RSCAIE
UBERON:0001474bone element27.490.076See source data
RSCAIE
UBERON:0000992ovary31.940.066See source data
RSCAIE
UBERON:0000080mesonephros41.560.258See source data
RSCAIE
UBERON:0002107liver43.260.121See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Teleostei

12 species

Danio rerio (zebrafish)

Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)

Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Neopterygii

13 species

Danio rerio (zebrafish)

Lepisosteus oculatus (Spotted gar)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)

Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Chordata

14 species

Danio rerio (zebrafish)

Lepisosteus oculatus (Spotted gar)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)

Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Branchiostoma lanceolatum (Common lancelet)
Compare expression
Bilateria

15 species

Danio rerio (zebrafish)

Caenorhabditis elegans (nematode)
Lepisosteus oculatus (Spotted gar)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)

Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Branchiostoma lanceolatum (Common lancelet)
Compare expression

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Teleostei

1 gene

118209205 LOC118209205
Compare expression
Eumetazoa

3 genes

118206551 LOC118206551
118209205 LOC118209205
118212169 LOC118212169
Compare expression
Opisthokonta

5 genes

118206551 LOC118206551
118209205 LOC118209205
118212169 LOC118212169
118213153 LOC118213153
118213401 stoml2
Compare expression

Cross-references

RefSeq

stoml3b (stoml3b)