Xenopus laevis

Gene : slc39a1.L - 733173 - Xenopus laevis (African clawed frog)

General information

Gene identifier

733173

Name

slc39a1.L

Description

Uncharacterized protein

Synonym(s)

slc39a1,XELAEV_18040874mg

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0001846internal ear93.071.37e-8See source data
RSCAIE
CL:0000023oocyte87.461.82e-9See source data
RSCAIE
UBERON:0002048lung81.312.61e-7See source data
RSCAIE
UBERON:0000992ovary77.653.66e-12See source data
RSCAIE
UBERON:0000473testis77.602.93e-10See source data
RSCAIE
UBERON:0002385muscle tissue77.468.84e-6See source data
RSCAIE
UBERON:0000948heart76.937.80e-7See source data
RSCAIE
UBERON:0002106spleen74.731.38e-6See source data
RSCAIE
UBERON:0002107liver72.976.81e-7See source data
RSCAIE
UBERON:0000307blastula70.147.29e-7See source data
RSCAIE
UBERON:0002113kidney69.679.00e-7See source data
RSCAIE
UBERON:0004455neurula embryo68.912.65e-7See source data
RSCAIE
UBERON:0004734gastrula66.568.27e-6See source data
RSCAIE
UBERON:0000160intestine64.891.80e-5See source data
RSCAIE
UBERON:0001264pancreas63.644.56e-5See source data
RSCAIE
UBERON:0000019camera-type eye62.482.89e-6See source data
RSCAIE
CL:0000025egg cell59.622.62e-4See source data
RSCAIE
UBERON:0000945stomach58.862.10e-5See source data
RSCAIE
UBERON:0000955brain53.938.95e-5See source data
RSCAIE
UBERON:0000014zone of skin52.212.85e-4See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

No reported absence of expression for this gene

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Xenopus

1 species

Xenopus tropicalis (western clawed frog)

1 gene

Compare expression
Tetrapoda

27 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)

Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)

Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)

Papio anubis (Olive baboon)

Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Compare expression
Sarcopterygii

28 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)

Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)

Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)

Papio anubis (Olive baboon)

Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Latimeria chalumnae (Coelacanth)
Compare expression
Euteleostomi

36 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)

Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)

Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)

Papio anubis (Olive baboon)

Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Anguilla anguilla (European freshwater eel)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Latimeria chalumnae (Coelacanth)

41 genes

Compare expression
Chordata

37 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)

Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)

Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)

Papio anubis (Olive baboon)

Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Anguilla anguilla (European freshwater eel)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Branchiostoma lanceolatum (Common lancelet)





Latimeria chalumnae (Coelacanth)

47 genes

Compare expression

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Gnathostomata

3 genes

108697069 slc39a2.L
108711433 slc39a1l.L
735050 slc39a1l.S
Compare expression
Bilateria

5 genes

108697069 slc39a2.L
108706838 slc39a3.S
108711433 slc39a1l.L
108712423 slc39a3.L
735050 slc39a1l.S
Compare expression

Cross-references