Danio rerio

Gene : sox1a - ENSDARG00000069866 - Danio rerio (zebrafish)

General information

Expressed in brain and 8 other cell types or tissues.

Gene identifier

ENSDARG00000069866

Name

sox1a

Description

SRY-box transcription factor 1a [Source:NCBI gene;Acc:436756]

Synonym(s)

fi38c08,wu:fj38h03,fj38h03,wu:fi38c08,zgc:92865

Orthologs

Paralogs

Expression graph

80%

Expression table

80%

Reported absence of expression

80%

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Otophysi

1 species

Astyanax mexicanus (Blind cave fish)

1 gene

Compare expression
Clupeocephala

9 species

Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Compare expression
Teleostei

10 species

Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Compare expression
Neopterygii

11 species

Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Compare expression
Euteleostomi

22 species

Homo sapiens (human)
Mus musculus (mouse)
Capra hircus (Goat)
Oryctolagus cuniculus (rabbit)
Gallus gallus (chicken)
Cercocebus atys (Sooty mangabey)
Pan troglodytes (chimpanzee)
Manis javanica (Malayan pangolin)
Xenopus laevis (African clawed frog)

Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Latimeria chalumnae (Coelacanth)
Compare expression
Orthology information comes from OMA : ENSDARG00000069866.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Danio

Compare expression: table | graph

Clupeocephala

Compare expression: table | graph

Paralogy information comes from OMA : ENSDARG00000069866.

Cross-references