Gene : HS3ST1 - ENSG00000002587 - Homo sapiens (human)
General information
Gene identifier
ENSG00000002587
Name
HS3ST1
Description
heparan sulfate-glucosamine 3-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5194]
Organism
Synonym(s)
Orthologs
Paralogs
Expression
Show
entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| UBERON:0005384nasal cavity epithelium | 95.05 | 0.003 | See source data | |
| CL:0002328bronchial epithelial cell | 93.58 | 0.002 | See source data | |
| UBERON:0005030mucosa of paranasal sinus | 92.44 | 0.002 | See source data | |
| UBERON:0002119left ovary | 90.70 | 2.59e-14 | See source data | |
| UBERON:0004358caput epididymis | 89.55 | 0.002 | See source data | |
| UBERON:0000167oral cavity | 89.48 | 0.002 | See source data | |
| UBERON:0006920esophagus squamous epithelium | 89.42 | 0.002 | See source data | |
| CL:0002336buccal mucosa cell | 89.40 | 0.004 | See source data | |
| UBERON:0002118right ovary | 89.33 | <= 1.00e-14 | See source data | |
| UBERON:0001812palpebral conjunctiva | 89.26 | 0.002 | See source data | |
| UBERON:0001951epithelium of nasopharynx | 88.15 | 0.004 | See source data | |
| UBERON:0001259mucosa of urinary bladder | 87.96 | 0.003 | See source data | |
| UBERON:0005386olfactory segment of nasal mucosa | 87.65 | <= 1.00e-14 | See source data | |
| UBERON:0000355pharyngeal mucosa | 85.92 | 0.003 | See source data | |
| CL:0000083epithelial cell of pancreas | 85.66 | 0.013 | See source data | |
| UBERON:0002110gall bladder | 84.26 | <= 1.00e-14 | See source data | |
| UBERON:0003126trachea | 84.02 | 0.005 | See source data | |
| UBERON:0004720cerebellar vermis | 83.47 | 0.004 | See source data | |
| CL:0002079pancreatic ductal cell | 83.13 | 0.015 | See source data | |
| UBERON:0001304germinal epithelium of ovary | 82.63 | 0.006 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Reported absence of expression
Show
entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| CL:0002255stromal cell of endometrium | 29.87 | 1 | See source data | |
| CL:0000115endothelial cell | 39.75 | 0.395 | See source data | |
| CL:0000023oocyte | 39.80 | 0.969 | See source data | |
| UBERON:0001782pigmented layer of retina | 41.33 | 0.813 | See source data | |
| CL:0000655secondary oocyte | 42.57 | 0.703 | See source data | |
| UBERON:0004511skeletal muscle tissue of rectus abdominis | 43.37 | 0.945 | See source data | |
| UBERON:0001385tibialis anterior | 44.98 | 0.1 | See source data | |
| UBERON:0004262upper leg skin | 46.41 | 0.1 | See source data | |
| UBERON:0000331ileal mucosa | 46.77 | 0.1 | See source data | |
| UBERON:0004811endometrium epithelium | 46.85 | 1 | See source data | |
| UBERON:0002000gluteal muscle | 47.03 | 0.571 | See source data | |
| UBERON:0001103diaphragm | 47.05 | 0.923 | See source data | |
| UBERON:0004263upper arm skin | 48.06 | 0.975 | See source data | |
| UBERON:0006566left ventricle myocardium | 48.24 | 0.935 | See source data | |
| UBERON:0004797blood vessel layer | 49.29 | 0.876 | See source data | |
| UBERON:0003881CA1 field of hippocampus | 49.94 | 0.118 | See source data | |
| UBERON:0013541Brodmann (1909) area 10 | 50.18 | 0.996 | See source data | |
| UBERON:0002702middle frontal gyrus | 50.30 | 0.994 | See source data | |
| UBERON:0002795frontal pole | 50.41 | 0.998 | See source data | |
| UBERON:0002127inferior olivary complex | 52.74 | 0.261 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Sources of raw data:
- Affymetrix data: ArrayExpress, GEO
- RNA-Seq data: GEO, GTEx - dbGAP, SRA
Orthologs
Taxon Name | Species with orthologs | Gene(s) | Expression comparison | See details |
|---|---|---|---|---|
| Homininae | 3 species | 3 genes | Compare expression | |
| Catarrhini | 8 species | 8 genes | Compare expression | |
| Simiiformes | 9 species | 9 genes | Compare expression | |
| Primates | 10 species | 10 genes | Compare expression | |
| Euarchontoglires | 13 species | 13 genes | Compare expression | |
| Boreoeutheria | 19 species | 19 genes | Compare expression | |
| Theria | 20 species | 20 genes | Compare expression | |
| Mammalia | 21 species | 21 genes | Compare expression | |
| Amniota | 23 species | 23 genes | Compare expression | |
| Tetrapoda | 25 species | 26 genes | Compare expression | |
| Sarcopterygii | 26 species | 27 genes | Compare expression | |
| Euteleostomi | 35 species | 36 genes | Compare expression |
Paralogs (same species)
Taxon Name | Gene(s) | Expression comparison | See details |
|---|---|---|---|
| Vertebrata | 1 gene | Compare expression |
Cross-references
CCDS
Ensembl
HGNC
EMBL
GeneCards
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL