Gene : OTX1 - ENSG00000115507 - Homo sapiens (human)
General information
Gene identifier
ENSG00000115507
Name
OTX1
Description
orthodenticle homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8521]
Organism
Synonym(s)
Orthologs
Paralogs
Expression
Show
entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Sources of annotations to anatomy and development:
Sources of raw data:
- Affymetrix data: ArrayExpress, GEO
- single-cell RNA-Seq data: SRA
- RNA-Seq data: GEO, GTEx - dbGAP, SRA
Reported absence of expression
Show
entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| UBERON:0002736lateral nuclear group of thalamus | 46.34 | 0.836 | See source data | |
| CL:0002092bone marrow cell | 46.56 | 0.85 | See source data | |
| UBERON:0006483Brodmann (1909) area 46 | 49.86 | 0.748 | See source data | |
| UBERON:0004263upper arm skin | 53.52 | 0.893 | See source data | |
| UBERON:0004720cerebellar vermis | 54.76 | 0.902 | See source data | |
| UBERON:0001782pigmented layer of retina | 54.99 | 0.743 | See source data | |
| CL:0000083epithelial cell of pancreas | 56.70 | 0.35 | See source data | |
| UBERON:0001379vastus lateralis | 57.26 | 0.975 | See source data | |
| UBERON:0002349myocardium | 57.88 | 0.89 | See source data | |
| CL:0002079pancreatic ductal cell | 61.24 | 0.1 | See source data | |
| UBERON:0006566left ventricle myocardium | 68.49 | 0.788 | See source data | |
| UBERON:0003379cardiac muscle of right atrium | 68.70 | 0.836 | See source data | |
| UBERON:0000331ileal mucosa | 71.08 | 0.1 | See source data | |
| UBERON:0004819kidney epithelium | 73.43 | 0.788 | See source data | |
| UBERON:0001385tibialis anterior | 74.09 | 0.1 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Sources of annotations to anatomy and development:
Sources of raw data:
- Affymetrix data: ArrayExpress, GEO
- EST data: UniGene
- RNA-Seq data: GEO, GTEx - dbGAP, SRA
Orthologs
Taxon Name | Species with orthologs | Gene(s) | Expression comparison | See details |
|---|
Paralogs (same species)
Taxon Name | Gene(s) | Expression comparison | See details |
|---|
Cross-references
CCDS
Ensembl
HGNC
EMBL
GeneCards
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL