Homo sapiens

Gene : SCAND1 - ENSG00000171222 - Homo sapiens (human)

General information

Gene identifier

ENSG00000171222

Name

SCAND1

Description

SCAN domain containing 1 [Source:HGNC Symbol;Acc:HGNC:10566]

Organism

Homo sapiens (human)

Synonym(s)

raz1,sdp1

Orthologs

19 orthologs

Source data

Retrieve all processed expression values for that gene

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0004991mucosa of transverse colon96.66<= 1.00e-14See source data
RSCAIE
UBERON:0005386olfactory segment of nasal mucosa96.61<= 1.00e-14See source data
RSCAIE
UBERON:0001233right adrenal gland95.77<= 1.00e-14See source data
RSCAIE
UBERON:0035827right adrenal gland cortex95.60<= 1.00e-14See source data
RSCAIE
UBERON:0035825left adrenal gland cortex95.56<= 1.00e-14See source data
RSCAIE
UBERON:0002196adenohypophysis95.45<= 1.00e-14See source data
RSCAIE
UBERON:0001114right lobe of liver95.33<= 1.00e-14See source data
RSCAIE
UBERON:0002098apex of heart95.04<= 1.00e-14See source data
RSCAIE
UBERON:0001302right uterine tube95.011.87e-11See source data
RSCAIE
UBERON:0010533metanephros cortex94.73<= 1.00e-14See source data
RSCAIE
UBERON:0001199mucosa of stomach94.68<= 1.00e-14See source data
RSCAIE
CL:0000094granulocyte94.532.75e-12See source data
RSCAIE
UBERON:0001626left coronary artery94.44<= 1.00e-14See source data
RSCAIE
UBERON:0035834lower esophagus mucosa94.387.35e-14See source data
RSCAIE
UBERON:0035833lower esophagus muscularis layer94.26<= 1.00e-14See source data
RSCAIE
UBERON:0001161body of stomach94.21<= 1.00e-14See source data
RSCAIE
UBERON:0035841esophagogastric junction muscularis propria94.20<= 1.00e-14See source data
RSCAIE
UBERON:0001303left uterine tube94.04<= 1.00e-14See source data
RSCAIE
UBERON:0001496ascending aorta94.02<= 1.00e-14See source data
RSCAIE
UBERON:0009835anterior cingulate cortex93.97<= 1.00e-14See source data
RSCAIE

Showing 1 to 20 of 192 entries

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores
important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

  • Affymetrix data: Bgee
  • EST data: Bgee
  • single-cell RNA-Seq data: Bgee
  • RNA-Seq data: Bgee

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
CL:0000019sperm62.570.353See source data
RSCAIE
UBERON:0003911choroid plexus epithelium67.460.051See source data
RSCAIE
UBERON:0002073hair follicle70.090.565See source data
RSCAIE
UBERON:0006922cervix squamous epithelium70.590.177See source data
RSCAIE
CL:0002336buccal mucosa cell70.770.424See source data
RSCAIE
UBERON:0008188tendon of biceps brachii72.160.077See source data
RSCAIE
UBERON:0001103diaphragm76.580.164See source data
RSCAIE
UBERON:0002264olfactory bulb76.980.429See source data
RSCAIE
CL:0000169type B pancreatic cell77.110.124See source data
RSCAIE
UBERON:0006919tongue squamous epithelium80.030.077See source data
RSCAIE
UBERON:0004720cerebellar vermis85.900.082See source data
RSCAIE
UBERON:0004087vena cava86.180.091See source data
RSCAIE

Showing 1 to 12 of 12 entries

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores
important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

  • Affymetrix data: Bgee

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Homininae

3 species

Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Compare expression
Catarrhini

5 species

Macaca mulatta (macaque)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Compare expression
Simiiformes

6 species

Callithrix jacchus (White-tufted-ear marmoset)
Macaca mulatta (macaque)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Compare expression
Euarchontoglires

10 species

Mus musculus (mouse)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Callithrix jacchus (White-tufted-ear marmoset)
Macaca mulatta (macaque)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Rattus norvegicus (rat)
Compare expression
Boreoeutheria

18 species

Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Callithrix jacchus (White-tufted-ear marmoset)
Macaca mulatta (macaque)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)

Rattus norvegicus (rat)
Compare expression

Showing 1 to 5 of 5 entries

Orthology information comes from OMA : ENSG00000171222.

Cross-references

CCDS

CCDS13269 (CCDS13269.1)

Ensembl

ENSG00000171222 (SCAND1)

HGNC

HGNC:10566 (SCAND1)

EMBL

AF204271,AL109965,BC000785,BC036709,BC041022,CH471077,CR457188

GeneCards

ENSG00000171222

UniProtKB/Swiss-Prot

P57086,SCND1_HUMAN
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