Homo sapiens

Gene : TRNP1 - ENSG00000253368 - Homo sapiens (human)

General information

Gene identifier

ENSG00000253368

Name

TRNP1

Description

TMF1 regulated nuclear protein 1 [Source:HGNC Symbol;Acc:HGNC:34348]

Synonym(s)

c1orf225,trnp

Orthologs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0003379cardiac muscle of right atrium97.770.003See source data
RSCAIE
UBERON:0002736lateral nuclear group of thalamus97.140.002See source data
RSCAIE
UBERON:0000355pharyngeal mucosa96.160.002See source data
RSCAIE
UBERON:0002469esophagus mucosa94.52<= 1.00e-14See source data
RSCAIE
UBERON:0035834lower esophagus mucosa94.328.24e-14See source data
RSCAIE
UBERON:0006566left ventricle myocardium93.970.005See source data
RSCAIE
UBERON:0005384nasal cavity epithelium93.610.006See source data
RSCAIE
CL:0000083epithelial cell of pancreas93.330.023See source data
RSCAIE
UBERON:0001161body of stomach93.15<= 1.00e-14See source data
RSCAIE
UBERON:0001166pylorus92.910.003See source data
RSCAIE
UBERON:0006920esophagus squamous epithelium92.770.002See source data
RSCAIE
UBERON:0001812palpebral conjunctiva92.590.002See source data
RSCAIE
CL:0002079pancreatic ductal cell92.530.01See source data
RSCAIE
UBERON:0000006islet of Langerhans92.30<= 1.00e-14See source data
RSCAIE
UBERON:0002450decidua92.060.002See source data
RSCAIE
UBERON:0001965substantia nigra pars compacta90.960.003See source data
RSCAIE
UBERON:0001162cardia of stomach90.940.003See source data
RSCAIE
UBERON:0013554Brodmann (1909) area 2390.750.003See source data
RSCAIE
UBERON:0000044dorsal root ganglion90.560.003See source data
RSCAIE
UBERON:0013540Brodmann (1909) area 990.524.85e-13See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

  • Affymetrix data: Bgee
  • single-cell RNA-Seq data: Bgee
  • RNA-Seq data: Bgee

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0008188tendon of biceps brachii39.600.909See source data
RSCAIE
UBERON:0004511skeletal muscle tissue of rectus abdominis43.370.465See source data
RSCAIE
CL:0002092bone marrow cell46.520.617See source data
RSCAIE
UBERON:0001379vastus lateralis49.320.75See source data
RSCAIE
CL:0002336buccal mucosa cell52.400.893See source data
RSCAIE
UBERON:0001507biceps brachii57.380.394See source data
RSCAIE
UBERON:0004502skeletal muscle tissue of biceps brachii62.000.131See source data
RSCAIE
UBERON:0001831parotid gland63.480.237See source data
RSCAIE
UBERON:0002370thymus68.310.133See source data
RSCAIE
CL:0000655secondary oocyte69.780.297See source data
RSCAIE
CL:0000115endothelial cell74.450.091See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Homininae

1 species

Pan troglodytes (chimpanzee)

1 gene

Compare expression
Catarrhini

7 species

Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Compare expression
Simiiformes

8 species

Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Compare expression
Euarchontoglires

10 species

Mus musculus (mouse)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Rattus norvegicus (rat)
Compare expression
Boreoeutheria

16 species

Mus musculus (mouse)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Compare expression
Orthology information comes from OMA : ENSG00000253368.

Cross-references

CCDS

CCDS41289 (CCDS41289.1)

Ensembl

HGNC

HGNC:34348 (TRNP1)

UniProtKB/Swiss-Prot

UniProtKB/TrEMBL