Homo sapiens

Gene : CLEC5A - ENSG00000258227 - Homo sapiens (human)

General information

Gene identifier

ENSG00000258227

Name

CLEC5A

Description

C-type lectin domain containing 5A [Source:HGNC Symbol;Acc:HGNC:2054]

Synonym(s)

mdl-1,clecsf5

Orthologs

Expression

80%

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
CL:0002255stromal cell of endometrium29.871See source data
RSCAIE
UBERON:0004991mucosa of transverse colon33.950.575See source data
RSCAIE
UBERON:0007023adult organism35.280.975See source data
RSCAIE
UBERON:0018303adrenal tissue36.320.272See source data
RSCAIE
UBERON:0005343cortical plate36.471See source data
RSCAIE
UBERON:0003053ventricular zone36.481See source data
RSCAIE
UBERON:0002771middle temporal gyrus38.720.996See source data
RSCAIE
UBERON:0004360cauda epididymis38.740.992See source data
RSCAIE
UBERON:0004358caput epididymis38.750.992See source data
RSCAIE
UBERON:0000998seminal vesicle38.750.975See source data
RSCAIE
UBERON:0002476lateral globus pallidus38.810.876See source data
RSCAIE
UBERON:0000979tibia38.930.998See source data
RSCAIE
UBERON:0004359corpus epididymis38.980.996See source data
RSCAIE
UBERON:0002736lateral nuclear group of thalamus39.000.975See source data
RSCAIE
UBERON:0002477medial globus pallidus39.180.995See source data
RSCAIE
UBERON:0011876body of tongue39.220.995See source data
RSCAIE
UBERON:0001965substantia nigra pars compacta39.230.975See source data
RSCAIE
UBERON:0000355pharyngeal mucosa39.270.98See source data
RSCAIE
UBERON:0004087vena cava39.310.962See source data
RSCAIE
UBERON:0002691ventral tegmental area39.350.99See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Homininae

2 species

Gorilla gorilla (gorilla)
Pan troglodytes (chimpanzee)
Compare expression
Catarrhini

8 species

Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Compare expression
Primates

9 species

Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Compare expression
Euarchontoglires

13 species

Mus musculus (mouse)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Rattus norvegicus (rat)
Compare expression
Boreoeutheria

21 species

Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Compare expression
Theria

22 species

Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Compare expression
Mammalia

23 species

Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Compare expression
Orthology information comes from OMA : ENSG00000258227.

Cross-references