Homo sapiens

Gene : PCDHB16 - ENSG00000272674 - Homo sapiens (human)

General information

Gene identifier

ENSG00000272674

Name

PCDHB16

Description

protocadherin beta 16 [Source:HGNC Symbol;Acc:HGNC:14546]

Synonym(s)

kiaa1621,me1,pcdh-beta16,pcdh3x,pcdhb8a

Orthologs

Expression

80%

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
CL:0000576monocyte31.751See source data
RSCAIE
CL:0000094granulocyte35.410.472See source data
RSCAIE
UBERON:0000355pharyngeal mucosa39.270.995See source data
RSCAIE
UBERON:0004087vena cava39.310.703See source data
RSCAIE
UBERON:0000988pons39.510.969See source data
RSCAIE
CL:0002328bronchial epithelial cell39.650.998See source data
RSCAIE
CL:0000115endothelial cell39.750.995See source data
RSCAIE
CL:0000023oocyte39.800.998See source data
RSCAIE
UBERON:0004993mucosa of sigmoid colon40.220.572See source data
RSCAIE
UBERON:0006920esophagus squamous epithelium40.290.997See source data
RSCAIE
UBERON:0001949gingival epithelium40.430.998See source data
RSCAIE
UBERON:0001951epithelium of nasopharynx40.450.998See source data
RSCAIE
UBERON:0000399jejunal mucosa40.590.969See source data
RSCAIE
UBERON:0000173amniotic fluid40.690.998See source data
RSCAIE
UBERON:0002418cartilage tissue40.770.734See source data
RSCAIE
UBERON:0001812palpebral conjunctiva41.100.997See source data
RSCAIE
UBERON:0002370thymus41.340.2See source data
RSCAIE
UBERON:0001723tongue41.670.998See source data
RSCAIE
UBERON:0001507biceps brachii41.910.743See source data
RSCAIE
CL:0002092bone marrow cell41.931See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Homininae

2 species

Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Compare expression
Euarchontoglires

4 species

Compare expression
Orthology information comes from OMA : ENSG00000272674.

Cross-references

CCDS

CCDS4251 (CCDS4251.1)

Ensembl

ENSG00000272674 (PCDHB16)

HGNC

HGNC:14546 (PCDHB16)

UniProtKB/Swiss-Prot