Search Genes

Gene : PCDHB16 - ENSG00000272674 - Homo sapiens (human)

General information

Gene identifier

ENSG00000272674

Name

PCDHB16

Description

protocadherin beta 16 [Source:HGNC Symbol;Acc:HGNC:14546]

Organism

Homo sapiens (human)

Synonym(s)

kiaa1621,me1,pcdh-beta16,pcdh3x,pcdhb8a

Orthologs

4 orthologs

Source data

Retrieve all processed expression values for that gene

Expression

80%

Reported absence of expression

Anat. entity and cell typesDev. stageSexStrain

Filter:

Show

entries

Anatomical entity	Expression score	FDR	Link to source data	Sources
CL:0000576monocyte	31.75	1	See source data	RSCAIE
CL:0000094granulocyte	35.41	0.472	See source data	RSCAIE
UBERON:0000355pharyngeal mucosa	39.27	0.995	See source data	RSCAIE
UBERON:0004087vena cava	39.31	0.703	See source data	RSCAIE
UBERON:0000988pons	39.51	0.969	See source data	RSCAIE
CL:0002328bronchial epithelial cell	39.65	0.998	See source data	RSCAIE
CL:0000115endothelial cell	39.75	0.995	See source data	RSCAIE
CL:0000023oocyte	39.80	0.998	See source data	RSCAIE
UBERON:0004993mucosa of sigmoid colon	40.22	0.572	See source data	RSCAIE
UBERON:0006920esophagus squamous epithelium	40.29	0.997	See source data	RSCAIE
UBERON:0001949gingival epithelium	40.43	0.998	See source data	RSCAIE
UBERON:0001951epithelium of nasopharynx	40.45	0.998	See source data	RSCAIE
UBERON:0000399jejunal mucosa	40.59	0.969	See source data	RSCAIE
UBERON:0000173amniotic fluid	40.69	0.998	See source data	RSCAIE
UBERON:0002418cartilage tissue	40.77	0.734	See source data	RSCAIE
UBERON:0001812palpebral conjunctiva	41.10	0.997	See source data	RSCAIE
UBERON:0002370thymus	41.34	0.2	See source data	RSCAIE
UBERON:0001723tongue	41.67	0.998	See source data	RSCAIE
UBERON:0001507biceps brachii	41.91	0.743	See source data	RSCAIE
CL:0002092bone marrow cell	41.93	1	See source data	RSCAIE

Showing 1 to 20 of 42 entries

Sources

A Affimetrix

E EST

I In Situ

R RNA-Seq

SC scRNA-Seq

datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Affymetrix data: Bgee
RNA-Seq data: Bgee

Sources of raw data:

Affymetrix data: ArrayExpress, GEO
RNA-Seq data: GEO, GTEx - dbGAP, SRA

Orthologs

Filter:

Taxon Name	Species with orthologs	Gene(s)	Expression comparison	See details
Homininae	2 species Pan paniscus (bonobo) Pan troglodytes (chimpanzee)	2 genes ENSPPAG00000030932 ENSPTRG00000017338 PCDHB16	Compare expression
Euarchontoglires	4 species Mus musculus (mouse) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Rattus norvegicus (rat)	4 genes ENSMUSG00000046387 Pcdhb17 ENSPPAG00000030932 ENSPTRG00000017338 PCDHB16 ENSRNOG00000039471 LOC108348771	Compare expression