Pan troglodytes

Gene : PCDHB16 - ENSPTRG00000017338 - Pan troglodytes (chimpanzee)

General information

Gene identifier

ENSPTRG00000017338

Name

PCDHB16

Description

protocadherin beta 16 [Source:NCBI gene (formerly Entrezgene);Acc:462133]

Synonym(s)

pcdhb8a

Orthologs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0001155colon92.057.61e-8See source data
RSCAIE
UBERON:0002048lung84.537.96e-6See source data
RSCAIE
UBERON:0000007pituitary gland82.904.90e-6See source data
RSCAIE
UBERON:0002106spleen76.601.94e-5See source data
RSCAIE
UBERON:0000029lymph node70.071.97e-5See source data
RSCAIE
UBERON:0000082adult mammalian kidney63.818.49e-5See source data
RSCAIE
UBERON:0000948heart58.097.50e-5See source data
RSCAIE
UBERON:0001225cortex of kidney55.771.53e-5See source data
RSCAIE
UBERON:0002037cerebellum53.672.75e-6See source data
RSCAIE
UBERON:0001134skeletal muscle tissue53.637.30e-4See source data
RSCAIE
UBERON:0000451prefrontal cortex50.461.84e-8See source data
RSCAIE
UBERON:0002129cerebellar cortex50.267.38e-5See source data
RSCAIE
UBERON:0009834dorsolateral prefrontal cortex50.131.27e-4See source data
RSCAIE
UBERON:0000473testis49.563.03e-4See source data
RSCAIE
UBERON:0002436primary visual cortex49.055.42e-6See source data
RSCAIE
UBERON:0001871temporal lobe49.020.002See source data
RSCAIE
CL:0000057fibroblast47.211.55e-5See source data
RSCAIE
UBERON:0013541Brodmann (1909) area 1047.030.001See source data
RSCAIE
UBERON:0002370thymus46.650.007See source data
RSCAIE
UBERON:0002107liver46.370.002See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0002371bone marrow27.150.225See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Pan

1 species

Pan paniscus (bonobo)
Compare expression
Homininae

2 species

Homo sapiens (human)
Pan paniscus (bonobo)
Compare expression
Euarchontoglires

4 species

Compare expression
Orthology information comes from OMA : ENSPTRG00000017338.