Gene : Prpf38b - ENSMUSG00000027881 - Mus musculus (mouse)
General information
Gene identifier
ENSMUSG00000027881
Name
Prpf38b
Description
PRP38 pre-mRNA processing factor 38 (yeast) domain containing B [Source:MGI Symbol;Acc:MGI:1914171]
Organism
Synonym(s)
Orthologs
Paralogs
Expression
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entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| UBERON:0007144embryonic post-anal tail | 99.61 | <= 1.00e-14 | See source data | |
| UBERON:0005876undifferentiated genital tubercle | 99.59 | 1.42e-14 | See source data | |
| UBERON:0003902retinal neural layer | 97.60 | 3.44e-9 | See source data | |
| CL:0000365animal zygote | 96.27 | 4.77e-10 | See source data | |
| UBERON:0002370thymus | 96.25 | 1.22e-13 | See source data | |
| UBERON:0005418hindlimb bud | 95.92 | 2.55e-14 | See source data | |
| UBERON:0004364ectoplacental cone | 95.51 | 1.81e-11 | See source data | |
| UBERON:0002129cerebellar cortex | 95.45 | 2.14e-10 | See source data | |
| CL:0000094granulocyte | 95.14 | 5.60e-9 | See source data | |
| UBERON:0003968peripheral lymph node | 95.13 | 0.002 | See source data | |
| UBERON:0001040yolk sac | 95.09 | 1.39e-10 | See source data | |
| CL:0000655secondary oocyte | 94.96 | 1.29e-9 | See source data | |
| UBERON:0005417forelimb bud | 94.84 | <= 1.00e-14 | See source data | |
| UBERON:0003066pharyngeal arch 2 | 94.68 | 0.002 | See source data | |
| UBERON:0002106spleen | 94.60 | 3.42e-13 | See source data | |
| UBERON:0003053ventricular zone | 94.53 | 1.28e-10 | See source data | |
| UBERON:0002532epiblast (generic) | 94.52 | 3.34e-11 | See source data | |
| UBERON:0002661superior frontal gyrus | 93.46 | 4.80e-10 | See source data | |
| CL:0000510paneth cell | 93.37 | 0.002 | See source data | |
| UBERON:0005293cerebellum lobe | 93.09 | 0.002 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Reported absence of expression
Show
entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| UBERON:0002110gall bladder | 47.78 | 0.975 | See source data | |
| UBERON:0007371superior surface of tongue | 48.12 | 0.715 | See source data | |
| UBERON:1000015skin of snout | 48.19 | 0.985 | See source data | |
| UBERON:0002094interventricular septum | 55.98 | 0.131 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Sources of annotations to anatomy and development:
- Affymetrix data: Bgee
Sources of raw data:
- Affymetrix data: ArrayExpress, GEO
Orthologs
Taxon Name | Species with orthologs | Gene(s) | Expression comparison | See details |
|---|---|---|---|---|
| Murinae | 1 species | 1 gene | Compare expression | |
| Rodentia | 2 species | 2 genes | Compare expression | |
| Glires | 3 species | 3 genes | Compare expression | |
| Euarchontoglires | 11 species | 11 genes | Compare expression | |
| Boreoeutheria | 16 species | 16 genes | Compare expression | |
| Theria | 17 species | 17 genes | Compare expression | |
| Mammalia | 18 species | 18 genes | Compare expression | |
| Amniota | 20 species | 20 genes | Compare expression | |
| Tetrapoda | 22 species | 23 genes | Compare expression | |
| Sarcopterygii | 23 species | 24 genes | Compare expression | |
| Euteleostomi | 36 species | 39 genes | Compare expression | |
| Chordata | 37 species | 40 genes | Compare expression |
Paralogs (same species)
Taxon Name | Gene(s) | Expression comparison | See details |
|---|---|---|---|
| Metazoa | 1 gene | Compare expression |
Cross-references
CCDS
Ensembl
MGI
EMBL
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL