Mus musculus

Gene : Twist1 - ENSMUSG00000035799 - Mus musculus (mouse)

General information

Gene identifier

ENSMUSG00000035799

Name

Twist1

Description

twist basic helix-loop-helix transcription factor 1 [Source:MGI Symbol;Acc:MGI:98872]

Synonym(s)

pdt,ska<m10jus>,bhlha38,pluridigite,m-twist,charlie chaplin,ska10

Orthologs

Expression graph

Twist1Twist1[-]anatomical entity[+]peripheral nervous system[+]digestive system[+]skeletal system[+]endocrine system[+]hemolymphoid system[+]integumental system[+]sensory system[+]multicellular organism[+]connective tissue[+]reproductive system[+]renal system[+]musculature[+]central nervous system[ ]oocyte[ ]amniotic cavity[ ]spermatid[ ]extraembryonic ectoderm[ ]amniotic fold[ ]myotome[ ]entire extraembryonic component[ ]notochordal process[ ]secondary oocyte[ ]spermatocyte[ ]animal zygote[ ]primary oocyte[ ]umbilical cord[ ]migratory enteric neural crest cell[ ]dermatomeExpression score020406080100Not expressedNo data
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Expression table

80%

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0003902retinal neural layer22.171See source data
RSCAIE
UBERON:0004024medial ganglionic eminence25.580.1See source data
RSCAIE
UBERON:0004734gastrula27.450.1See source data
RSCAIE
UBERON:0003053ventricular zone33.310.964See source data
RSCAIE
CL:0000017spermatocyte33.980.24See source data
RSCAIE
CL:0000655secondary oocyte34.941See source data
RSCAIE
CL:0000510paneth cell35.140.893See source data
RSCAIE
UBERON:0001276epithelium of stomach35.550.935See source data
RSCAIE
CL:0000365animal zygote35.581See source data
RSCAIE
UBERON:0001736submandibular gland36.770.2See source data
RSCAIE
UBERON:0006518right lung lobe37.120.945See source data
RSCAIE
UBERON:0000127facial nucleus37.230.703See source data
RSCAIE
CL:0000654primary oocyte38.010.867See source data
RSCAIE
UBERON:0002038substantia nigra38.280.909See source data
RSCAIE
UBERON:0002257ventral horn of spinal cord38.410.114See source data
RSCAIE
UBERON:0003454small intestine Peyer's patch38.530.1See source data
RSCAIE
UBERON:0008881rostral migratory stream38.620.893See source data
RSCAIE
UBERON:0008951left lung lobe38.650.605See source data
RSCAIE
UBERON:0001882nucleus accumbens39.040.984See source data
RSCAIE
UBERON:0005343cortical plate39.110.137See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

  • Affymetrix data: Bgee
  • in situ hybridization data: MGI
  • RNA-Seq data: Bgee

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Murinae

1 species

1 gene

Compare expression
Euarchontoglires

5 species

Homo sapiens (human)
Callithrix jacchus (White-tufted-ear marmoset)
Macaca fascicularis (Crab-eating macaque)
Chlorocebus sabaeus (Green monkey)
Rattus norvegicus (rat)
Compare expression
Boreoeutheria

11 species

Homo sapiens (human)
Felis catus (cat)
Equus caballus (horse)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Callithrix jacchus (White-tufted-ear marmoset)
Macaca fascicularis (Crab-eating macaque)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Compare expression
Theria

12 species

Homo sapiens (human)
Felis catus (cat)
Equus caballus (horse)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Callithrix jacchus (White-tufted-ear marmoset)
Macaca fascicularis (Crab-eating macaque)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Compare expression
Mammalia

13 species

Homo sapiens (human)
Felis catus (cat)
Equus caballus (horse)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Macaca fascicularis (Crab-eating macaque)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Compare expression
Amniota

14 species

Homo sapiens (human)
Felis catus (cat)
Equus caballus (horse)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Macaca fascicularis (Crab-eating macaque)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Anolis carolinensis (green anole)
Compare expression
Tetrapoda

16 species

Homo sapiens (human)
Felis catus (cat)
Equus caballus (horse)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Macaca fascicularis (Crab-eating macaque)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Compare expression
Sarcopterygii

17 species

Homo sapiens (human)
Felis catus (cat)
Equus caballus (horse)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Macaca fascicularis (Crab-eating macaque)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Latimeria chalumnae (Coelacanth)
Compare expression
Euteleostomi

30 species

Homo sapiens (human)
Danio rerio (zebrafish)

Felis catus (cat)
Equus caballus (horse)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Macaca fascicularis (Crab-eating macaque)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)

Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Latimeria chalumnae (Coelacanth)

33 genes

Compare expression
Orthology information comes from OMA : ENSMUSG00000035799.

Cross-references

CCDS

CCDS25879 (CCDS25879.1)

Ensembl

MGI

MGI:98872 (Twist1)

UniProtKB/Swiss-Prot