Mus musculus

Gene : Septin9 - ENSMUSG00000059248 - Mus musculus (mouse)

General information

Gene identifier

ENSMUSG00000059248

Name

Septin9

Description

septin 9 [Source:MGI Symbol;Acc:MGI:1858222]

Synonym(s)

sint1,msf,msf1,pnutl4,sl3-3 integration site 1,sept9

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0004364ectoplacental cone99.05<= 1.00e-14See source data
RSCAIE
UBERON:0003946placenta labyrinth98.470.002See source data
RSCAIE
UBERON:0007144embryonic post-anal tail98.233.41e-11See source data
RSCAIE
UBERON:0005418hindlimb bud97.655.34e-14See source data
RSCAIE
CL:0000094granulocyte97.433.26e-10See source data
RSCAIE
UBERON:0005417forelimb bud97.41<= 1.00e-14See source data
RSCAIE
UBERON:0003053ventricular zone97.151.23e-11See source data
RSCAIE
UBERON:0005876undifferentiated genital tubercle97.061.14e-11See source data
RSCAIE
UBERON:00072371st arch mandibular component96.980.002See source data
RSCAIE
UBERON:00072381st arch maxillary component96.570.002See source data
RSCAIE
UBERON:0001496ascending aorta96.520.002See source data
RSCAIE
UBERON:0002370thymus96.331.30e-13See source data
RSCAIE
UBERON:0002290choroid plexus of fourth ventricle96.230.01See source data
RSCAIE
UBERON:0001532internal carotid artery95.870.003See source data
RSCAIE
UBERON:0012314embryonic facial prominence95.843.60e-11See source data
RSCAIE
UBERON:0004339vault of skull95.810.002See source data
RSCAIE
UBERON:0005867mandibular prominence95.670.002See source data
RSCAIE
UBERON:0005868maxillary prominence95.530.002See source data
RSCAIE
UBERON:0004066frontonasal prominence95.520.002See source data
RSCAIE
UBERON:0001040yolk sac95.191.57e-10See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

  • Affymetrix data: Bgee
  • EST data: Bgee
  • in situ hybridization data: MGI
  • single-cell RNA-Seq data: Bgee
  • RNA-Seq data: Bgee

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
CL:0000654primary oocyte43.300.65See source data
RSCAIE
CL:0000365animal zygote46.210.889See source data
RSCAIE
UBERON:0007010cleaving embryo47.230.185See source data
RSCAIE
UBERON:0002038substantia nigra55.610.909See source data
RSCAIE
UBERON:0002836lumbar dorsal root ganglion55.710.1See source data
RSCAIE
CL:0000655secondary oocyte56.270.13See source data
RSCAIE
UBERON:0001803epithelium of lens57.790.061See source data
RSCAIE
UBERON:0010415barrel cortex58.840.876See source data
RSCAIE
UBERON:0007615prostate gland ventral lobe59.380.935See source data
RSCAIE
UBERON:0001488ankle joint61.780.761See source data
RSCAIE
UBERON:0005293cerebellum lobe62.760.703See source data
RSCAIE
UBERON:0004720cerebellar vermis63.540.672See source data
RSCAIE
UBERON:0001904habenula69.220.143See source data
RSCAIE
UBERON:0001926lateral geniculate body70.260.534See source data
RSCAIE
UBERON:0003382cardiac muscle of left ventricle70.570.173See source data
RSCAIE
UBERON:0002206mammillary body70.830.131See source data
RSCAIE
UBERON:0005383caudate-putamen71.010.429See source data
RSCAIE
UBERON:0001128sternocleidomastoid71.160.1See source data
RSCAIE
UBERON:0002691ventral tegmental area71.420.075See source data
RSCAIE
UBERON:0001927medial geniculate body71.650.361See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Glires

1 species

Compare expression
Euarchontoglires

13 species

Homo sapiens (human)
Oryctolagus cuniculus (rabbit)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Compare expression
Mammalia

14 species

Homo sapiens (human)
Oryctolagus cuniculus (rabbit)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Compare expression
Euteleostomi

22 species

Homo sapiens (human)
Danio rerio (zebrafish)

Oryctolagus cuniculus (rabbit)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)

Poecilia reticulata (Guppy)

Oryzias latipes (Japanese rice fish)
Neolamprologus brichardi (Fairy cichlid)

Scophthalmus maximus (Turbot)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Chordata

23 species

Homo sapiens (human)
Danio rerio (zebrafish)

Oryctolagus cuniculus (rabbit)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)

Poecilia reticulata (Guppy)

Oryzias latipes (Japanese rice fish)
Neolamprologus brichardi (Fairy cichlid)

Scophthalmus maximus (Turbot)
Nothobranchius furzeri (Turquoise killifish)
Branchiostoma lanceolatum (Common lancelet)
Compare expression
Orthology information comes from OMA : ENSMUSG00000059248.

Paralogs (same species)

Paralogy information comes from OMA : ENSMUSG00000059248.

Cross-references

CCDS

CCDS25684 (CCDS25684.1),CCDS48990 (CCDS48990.1),CCDS48991 (CCDS48991.1)

Ensembl

MGI

MGI:1858222 (Septin9)

UniProtKB/Swiss-Prot