Salmo salar

Gene : irf2bp2a - ENSSSAG00000010391 - Salmo salar (Atlantic salmon)

General information

Gene identifier

ENSSSAG00000010391

Name

irf2bp2a

Description

interferon regulatory factor 2-binding protein 2-A-like [Source:NCBI gene;Acc:106590005]

Synonym(s)

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000948heart71.341.73e-4See source data
RSCAIE
UBERON:0000992ovary65.821.23e-4See source data
RSCAIE
UBERON:0000004nose63.789.89e-5See source data
RSCAIE
UBERON:0002106spleen62.723.90e-4See source data
RSCAIE
UBERON:0005870olfactory pit61.547.91e-5See source data
RSCAIE
UBERON:0007132head kidney57.850.002See source data
RSCAIE
UBERON:0006866terminal part of digestive tract57.470.001See source data
RSCAIE
UBERON:0001046hindgut56.650.001See source data
RSCAIE
UBERON:0000080mesonephros56.298.00e-4See source data
RSCAIE
UBERON:0002328notochord51.700.011See source data
RSCAIE
UBERON:0009120gill filament51.150.004See source data
RSCAIE
UBERON:0000206pharyngeal gill50.570.001See source data
RSCAIE
UBERON:2005272immature gonad50.002.30e-4See source data
RSCAIE
UBERON:0002116ileum49.450.004See source data
RSCAIE
UBERON:0000955brain46.270.007See source data
RSCAIE
UBERON:0007021sexually immature organism45.431.39e-4See source data
RSCAIE
UBERON:0000007pituitary gland44.730.011See source data
RSCAIE
UBERON:0000014zone of skin37.320.015See source data
RSCAIE
UBERON:0000473testis36.296.69e-4See source data
RSCAIE
UBERON:0000970eye29.500.037See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0006908fast muscle tissue34.610.498See source data
RSCAIE
UBERON:0000019camera-type eye35.500.059See source data
RSCAIE
UBERON:0001045midgut38.250.163See source data
RSCAIE
UBERON:0001968semen49.570.186See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Euteleostomi

21 species

Homo sapiens (human)
Mus musculus (mouse)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Latimeria chalumnae (Coelacanth)
Compare expression
Orthology information comes from OMA : ENSSSAG00000010391.

Paralogs (same species)

Paralogy information comes from OMA : ENSSSAG00000010391.

Cross-references

Ensembl

ZFIN