Sus scrofa

Gene : PTPN22 - ENSSSCG00000006764 - Sus scrofa (pig)

General information

Gene identifier

ENSSSCG00000006764

Name

PTPN22

Description

protein tyrosine phosphatase non-receptor type 22 [Source:VGNC Symbol;Acc:VGNC:91978]

Synonym(s)

Orthologs

Expression

80%

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0001897dorsal plus ventral thalamus14.670.939See source data
RSCAIE
UBERON:0001876amygdala16.260.905See source data
RSCAIE
UBERON:0005417forelimb bud16.341See source data
RSCAIE
UBERON:0000988pons17.010.372See source data
RSCAIE
UBERON:0002336corpus callosum18.460.772See source data
RSCAIE
UBERON:0002421hippocampal formation19.480.885See source data
RSCAIE
UBERON:0000451prefrontal cortex20.120.573See source data
RSCAIE
UBERON:0016540occipital cortex21.441See source data
RSCAIE
UBERON:0001954Ammon's horn22.130.647See source data
RSCAIE
UBERON:0002037cerebellum23.641See source data
RSCAIE
UBERON:0005418hindlimb bud24.000.715See source data
RSCAIE
CL:0000501granulosa cell24.370.586See source data
RSCAIE
UBERON:0000007pituitary gland27.510.332See source data
RSCAIE
UBERON:0001896medulla oblongata28.150.107See source data
RSCAIE
UBERON:0001301epididymis28.940.242See source data
RSCAIE
UBERON:0010533metanephros cortex30.420.239See source data
RSCAIE
UBERON:0000473testis30.520.098See source data
RSCAIE
UBERON:0001134skeletal muscle tissue32.660.198See source data
RSCAIE
UBERON:0002084heart left ventricle34.760.141See source data
RSCAIE
UBERON:0000945stomach35.760.125See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Artiodactyla

3 species

Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Compare expression
Laurasiatheria

7 species

Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Manis javanica (Malayan pangolin)
Compare expression
Boreoeutheria

22 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Compare expression
Mammalia

23 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Compare expression
Amniota

26 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Anolis carolinensis (green anole)
Compare expression
Sarcopterygii

27 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Anolis carolinensis (green anole)
Latimeria chalumnae (Coelacanth)
Compare expression
Orthology information comes from OMA : ENSSSCG00000006764.

Cross-references