Manis javanica

Gene : CHMP1B - 108405273 - Manis javanica (Malayan pangolin)

General information

Gene identifier

108405273

Name

CHMP1B

Description

Synonym(s)

Orthologs

Paralogs

Expression

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entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0002370thymus88.582.77e-7See source data
RSCAIE
UBERON:0002106spleen88.282.98e-7See source data
RSCAIE
UBERON:0000948heart87.394.22e-8See source data
RSCAIE
UBERON:0001869cerebral hemisphere87.274.08e-7See source data
RSCAIE
UBERON:0000082adult mammalian kidney84.982.98e-6See source data
RSCAIE
UBERON:0002048lung84.693.00e-7See source data
RSCAIE
UBERON:0002037cerebellum82.937.17e-6See source data
RSCAIE
UBERON:0002107liver81.987.51e-7See source data
RSCAIE
UBERON:0001044saliva-secreting gland79.151.51e-6See source data
RSCAIE
UBERON:0002108small intestine78.021.33e-6See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

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entries

No reported absence of expression for this gene

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Laurasiatheria

3 species

Compare expression
Boreoeutheria

7 species

Compare expression
Theria

8 species

Compare expression
MammaliaCompare expression
Amniota

12 species

Compare expression
Tetrapoda

14 species

Homo sapiens (human)
Mus musculus (mouse)

Felis catus (cat)
Equus caballus (horse)
Ovis aries (Sheep)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Compare expression
Sarcopterygii

15 species

Homo sapiens (human)
Mus musculus (mouse)

Felis catus (cat)
Equus caballus (horse)
Ovis aries (Sheep)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Latimeria chalumnae (Coelacanth)
Compare expression
Euteleostomi

29 species

Homo sapiens (human)
Mus musculus (mouse)

Danio rerio (zebrafish)

Felis catus (cat)
Equus caballus (horse)
Ovis aries (Sheep)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)

Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Latimeria chalumnae (Coelacanth)

34 genes

Compare expression
Chordata

30 species

Homo sapiens (human)
Mus musculus (mouse)

Danio rerio (zebrafish)

Felis catus (cat)
Equus caballus (horse)
Ovis aries (Sheep)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)

Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Branchiostoma lanceolatum (Common lancelet)
Latimeria chalumnae (Coelacanth)

35 genes

Compare expression
Bilateria

34 species

Homo sapiens (human)
Mus musculus (mouse)

Danio rerio (zebrafish)

Drosophila melanogaster (fruit fly)
Caenorhabditis elegans (nematode)
Felis catus (cat)
Equus caballus (horse)
Ovis aries (Sheep)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)

Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Branchiostoma lanceolatum (Common lancelet)
Latimeria chalumnae (Coelacanth)
Drosophila pseudoobscura ()
Drosophila simulans ()

39 genes

Compare expression

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Metazoa

1 gene

108398338 CHMP1A
Compare expression
Opisthokonta

4 genes

108398338 CHMP1A
108402257 LOC108402257
108402887 CHMP2B
108408240 CHMP2A
Compare expression

Cross-references

RefSeq

CHMP1B (CHMP1B)