Xenopus laevis

Gene : LOC108704467 - 108704467 - Xenopus laevis (African clawed frog)

General information

Gene identifier

108704467

Name

LOC108704467

Description

Synonym(s)

Orthologs

Paralogs

Expression

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entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0002106spleen98.801.97e-13See source data
RSCAIE
UBERON:0002048lung98.591.24e-13See source data
RSCAIE
UBERON:0000945stomach97.522.03e-13See source data
RSCAIE
UBERON:0002113kidney96.406.11e-12See source data
RSCAIE
UBERON:0001846internal ear96.374.46e-10See source data
RSCAIE
UBERON:0000014zone of skin95.981.48e-11See source data
RSCAIE
UBERON:0000948heart95.812.02e-10See source data
RSCAIE
UBERON:0000160intestine94.935.64e-11See source data
RSCAIE
UBERON:0001264pancreas94.779.90e-12See source data
RSCAIE
CL:0000025egg cell94.745.37e-11See source data
RSCAIE
UBERON:0000019camera-type eye94.682.94e-10See source data
RSCAIE
UBERON:0004455neurula embryo93.471.62e-11See source data
RSCAIE
UBERON:0000955brain92.711.23e-8See source data
RSCAIE
UBERON:0002107liver92.075.80e-9See source data
RSCAIE
UBERON:0000307blastula85.672.04e-9See source data
RSCAIE
UBERON:0002385muscle tissue85.364.48e-7See source data
RSCAIE
UBERON:0000473testis84.429.18e-10See source data
RSCAIE
UBERON:0000992ovary82.231.67e-10See source data
RSCAIE
CL:0000023oocyte79.321.60e-8See source data
RSCAIE
UBERON:0004734gastrula73.914.94e-7See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

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entries

No reported absence of expression for this gene

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Xenopus

1 species

Xenopus tropicalis (western clawed frog)
Compare expression
Tetrapoda

28 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)

Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Compare expression
Sarcopterygii

29 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)

Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Latimeria chalumnae (Coelacanth)
Compare expression
Euteleostomi

39 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)


Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)

Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Scophthalmus maximus (Turbot)
Nothobranchius furzeri (Turquoise killifish)
Latimeria chalumnae (Coelacanth)

42 genes

Compare expression
Bilateria

40 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)


Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)

Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Scophthalmus maximus (Turbot)
Nothobranchius furzeri (Turquoise killifish)
Latimeria chalumnae (Coelacanth)
Drosophila pseudoobscura ()

43 genes

Compare expression

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Vertebrata

2 genes

733321 LOC733321
734178 flnc.L
Compare expression

Cross-references

RefSeq

LOC108704467 (LOC108704467)