Anguilla anguilla

Gene : LOC118218926 - 118218926 - Anguilla anguilla (European freshwater eel)

General information

Gene identifier

118218926

Name

LOC118218926

Description

Synonym(s)

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000080mesonephros70.090.004See source data
RSCAIE
UBERON:0000160intestine40.990.028See source data
RSCAIE
UBERON:0000206pharyngeal gill30.270.032See source data
RSCAIE
UBERON:0000473testis19.710.047See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0007021sexually immature organism12.570.302See source data
RSCAIE
UBERON:0000992ovary22.110.222See source data
RSCAIE
UBERON:0000955brain24.140.059See source data
RSCAIE
UBERON:0001474bone element24.190.123See source data
RSCAIE
UBERON:0000948heart28.360.146See source data
RSCAIE
UBERON:0002107liver31.230.384See source data
RSCAIE
UBERON:0006860swim bladder35.030.103See source data
RSCAIE
UBERON:0002385muscle tissue35.720.053See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Teleostei

8 species

Danio rerio (zebrafish)

Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Compare expression
Euteleostomi

36 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)

Canis lupus familiaris (dog)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)
Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Latimeria chalumnae (Coelacanth)

37 genes

Compare expression

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Anguilla

3 genes

118218927 LOC118218927
118218928 LOC118218928
118218929 LOC118218929
Compare expression
Neopterygii

10 genes

118218914 LOC118218914
118218915 LOC118218915
118218917 LOC118218917
118218923 LOC118218923
118218927 LOC118218927
118218928 LOC118218928
118218929 LOC118218929
118219196 LOC118219196
118219202 LOC118219202
118219208 LOC118219208
Compare expression

Cross-references

RefSeq

LOC118218926 (LOC118218926)