Anguilla anguilla

Gene : LOC118226797 - 118226797 - Anguilla anguilla (European freshwater eel)

General information

Gene identifier

118226797

Name

LOC118226797

Description

Synonym(s)

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000955brain64.164.64e-4See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000473testis5.310.412See source data
RSCAIE
UBERON:0007021sexually immature organism5.631See source data
RSCAIE
UBERON:0000206pharyngeal gill9.860.8See source data
RSCAIE
UBERON:0001474bone element10.840.73See source data
RSCAIE
UBERON:0000992ovary11.510.652See source data
RSCAIE
UBERON:0000160intestine11.540.907See source data
RSCAIE
UBERON:0002107liver12.571See source data
RSCAIE
UBERON:0000948heart17.100.563See source data
RSCAIE
UBERON:0006860swim bladder18.051See source data
RSCAIE
UBERON:0000080mesonephros22.720.875See source data
RSCAIE
UBERON:0002385muscle tissue31.700.097See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Teleostei

4 species

Danio rerio (zebrafish)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Compare expression
Neopterygii

5 species

Danio rerio (zebrafish)
Lepisosteus oculatus (Spotted gar)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Compare expression
Euteleostomi

37 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Latimeria chalumnae (Coelacanth)

39 genes

Compare expression
Chordata

38 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Branchiostoma lanceolatum (Common lancelet)




Latimeria chalumnae (Coelacanth)

44 genes

Compare expression

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Anguilla

1 gene

118232505 LOC118232505
Compare expression
Vertebrata

9 genes

118208978 LOC118208978
118209580 LOC118209580
118222710 LOC118222710
118225266 trpc1
118229545 LOC118229545
118232505 LOC118232505
118234976 trpc5a
118235253 trpc4a
118235588 trpc6a
Compare expression

Cross-references

RefSeq

LOC118226797 (LOC118226797)