Xenopus laevis

Gene : kdelr1-b - 447400 - Xenopus laevis (African clawed frog)

General information

Gene identifier

447400

Name

kdelr1-b

Description

ER lumen protein-retaining receptor 1-B

Synonym(s)

erd2.1,hdel,erd2,kdelr1,pm23,kdelr1-a

Orthologs

Paralogs

Expression

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entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0002048lung92.816.07e-9See source data
RSCAIE
UBERON:0002113kidney91.331.61e-9See source data
RSCAIE
UBERON:0000945stomach91.092.46e-9See source data
RSCAIE
UBERON:0002385muscle tissue90.562.28e-8See source data
RSCAIE
UBERON:0000473testis89.939.62e-11See source data
RSCAIE
UBERON:0002107liver89.524.55e-9See source data
RSCAIE
UBERON:0001264pancreas89.402.77e-8See source data
RSCAIE
UBERON:0000160intestine89.031.45e-8See source data
RSCAIE
UBERON:0002106spleen89.026.31e-8See source data
RSCAIE
UBERON:0000948heart88.591.08e-7See source data
RSCAIE
UBERON:0000014zone of skin88.033.64e-8See source data
RSCAIE
UBERON:0000019camera-type eye87.453.27e-8See source data
RSCAIE
UBERON:0001846internal ear86.833.59e-7See source data
RSCAIE
UBERON:0004455neurula embryo77.858.44e-8See source data
RSCAIE
UBERON:0000955brain77.212.12e-6See source data
RSCAIE
CL:0000023oocyte74.322.93e-7See source data
RSCAIE
UBERON:0000992ovary71.895.15e-9See source data
RSCAIE
CL:0000025egg cell65.517.61e-5See source data
RSCAIE
UBERON:0004734gastrula62.427.63e-5See source data
RSCAIE
UBERON:0000307blastula58.422.76e-5See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

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entries

No reported absence of expression for this gene

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Xenopus

1 species

Xenopus tropicalis (western clawed frog)

1 gene

Compare expression
Tetrapoda

24 species

Homo sapiens (human)
Mus musculus (mouse)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Compare expression
Sarcopterygii

25 species

Homo sapiens (human)
Mus musculus (mouse)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Latimeria chalumnae (Coelacanth)

Compare expression
Chordata

26 species

Homo sapiens (human)
Mus musculus (mouse)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Branchiostoma lanceolatum (Common lancelet)
Latimeria chalumnae (Coelacanth)

Compare expression
Bilateria

30 species

Homo sapiens (human)
Mus musculus (mouse)
Drosophila melanogaster (fruit fly)
Caenorhabditis elegans (nematode)

Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Branchiostoma lanceolatum (Common lancelet)
Latimeria chalumnae (Coelacanth)

Drosophila pseudoobscura ()

Drosophila simulans ()
Compare expression

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Xenopus

1 gene

398905 kdelr1-a
Compare expression
Tetrapoda

2 genes

380330 kdelr2
398905 kdelr1-a
Compare expression
Metazoa

4 genes

108715792 kdelr3.S
379453 kdelr3
380330 kdelr2
398905 kdelr1-a
Compare expression

Cross-references