Astyanax mexicanus

Gene : smarcad1b - ENSAMXG00000019130 - Astyanax mexicanus (Blind cave fish)

General information

Expressed in testis and 13 other cell types or tissues.

Gene identifier

ENSAMXG00000019130

Name

smarcad1b

Description

SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1B-like [Source:NCBI gene;Acc:103041701]

Synonym(s)

Orthologs

Paralogs

Expression graph

80%

Expression table

80%

Reported absence of expression

80%

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Otophysi

1 species

Danio rerio (zebrafish)

1 gene

Compare expression
Clupeocephala

3 species

Danio rerio (zebrafish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

3 genes

Compare expression
Teleostei

4 species

Danio rerio (zebrafish)
Anguilla anguilla (European freshwater eel)

Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

5 genes

ENSDARG00000073721 smarcad1b
118206712 smarcad1a
118213166 LOC118213166
ENSELUG00000019154 smarcad1b
ENSSSAG00000046322 smarcad1b
Compare expression
Neopterygii

5 species

Danio rerio (zebrafish)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)

Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

6 genes

ENSDARG00000073721 smarcad1b
ENSLOCG00000012909 smarcad1a
118206712 smarcad1a
118213166 LOC118213166
ENSELUG00000019154 smarcad1b
ENSSSAG00000046322 smarcad1b
Compare expression
Euteleostomi

35 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)

Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

37 genes

Compare expression
Chordata

36 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)

Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Branchiostoma lanceolatum (Common lancelet)

38 genes

Compare expression
Bilateria

39 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Drosophila melanogaster (fruit fly)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)

Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Branchiostoma lanceolatum (Common lancelet)
Drosophila pseudoobscura ()
Drosophila simulans ()

41 genes

Compare expression
Orthology information comes from OMA : ENSAMXG00000019130.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Euteleostomi

1 gene

Compare expression: table | graph

Paralogy information comes from OMA : ENSAMXG00000019130.

Cross-references

Ensembl

ENSAMXG00000019130 (smarcad1b)

ZFIN

ZDB-GENE-091113-61 (smarcad1b)

UniProtKB/TrEMBL