Callithrix jacchus

Gene : - ENSCJAG00000011637 - Callithrix jacchus (White-tufted-ear marmoset)

General information

Gene identifier

ENSCJAG00000011637

Name

Description

IF rod domain-containing protein

Synonym(s)

ENSCJAP00000050768,ENSCJAT00000054660

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0002107liver59.061.79e-4See source data
RSCAIE
UBERON:0002113kidney45.425.26e-4See source data
RSCAIE
UBERON:0000948heart41.419.68e-4See source data
RSCAIE
UBERON:0000473testis40.360.004See source data
RSCAIE
UBERON:0001870frontal cortex36.120.004See source data
RSCAIE
UBERON:0000992ovary34.590.005See source data
RSCAIE
UBERON:0002037cerebellum30.050.024See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

No reported absence of expression for this gene

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Simiiformes

10 species

Homo sapiens (human)
Cercocebus atys (Sooty mangabey)


Macaca fascicularis (Crab-eating macaque)






Macaca mulatta (macaque)


Macaca nemestrina (Pig-tailed macaque)


Papio anubis (Olive baboon)



Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)



Compare expression
Primates

11 species

Homo sapiens (human)
Cercocebus atys (Sooty mangabey)


Macaca fascicularis (Crab-eating macaque)






Macaca mulatta (macaque)


Macaca nemestrina (Pig-tailed macaque)


Papio anubis (Olive baboon)



Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)



Compare expression
Euarchontoglires

15 species

Homo sapiens (human)
Mus musculus (mouse)
Oryctolagus cuniculus (rabbit)

Cavia porcellus (guinea pig)

Cercocebus atys (Sooty mangabey)


Macaca fascicularis (Crab-eating macaque)






Macaca mulatta (macaque)


Macaca nemestrina (Pig-tailed macaque)


Papio anubis (Olive baboon)



Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)



Rattus norvegicus (rat)
Compare expression
Boreoeutheria

23 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)


Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)

Ovis aries (Sheep)

Oryctolagus cuniculus (rabbit)

Cavia porcellus (guinea pig)

Cercocebus atys (Sooty mangabey)


Macaca fascicularis (Crab-eating macaque)






Macaca mulatta (macaque)


Macaca nemestrina (Pig-tailed macaque)


Papio anubis (Olive baboon)



Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)



Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)

47 genes

Compare expression
Theria

24 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)


Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)

Ovis aries (Sheep)

Oryctolagus cuniculus (rabbit)

Cavia porcellus (guinea pig)

Cercocebus atys (Sooty mangabey)


Macaca fascicularis (Crab-eating macaque)






Macaca mulatta (macaque)


Macaca nemestrina (Pig-tailed macaque)


Papio anubis (Olive baboon)



Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)



Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)

48 genes

Compare expression
Mammalia

25 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)


Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)

Ovis aries (Sheep)

Oryctolagus cuniculus (rabbit)

Cavia porcellus (guinea pig)

Ornithorhynchus anatinus (platypus)
Cercocebus atys (Sooty mangabey)


Macaca fascicularis (Crab-eating macaque)






Macaca mulatta (macaque)


Macaca nemestrina (Pig-tailed macaque)


Papio anubis (Olive baboon)



Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)



Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)

49 genes

Compare expression
Amniota

27 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)


Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)

Ovis aries (Sheep)

Oryctolagus cuniculus (rabbit)

Cavia porcellus (guinea pig)

Gallus gallus (chicken)
Ornithorhynchus anatinus (platypus)
Cercocebus atys (Sooty mangabey)


Macaca fascicularis (Crab-eating macaque)






Macaca mulatta (macaque)


Macaca nemestrina (Pig-tailed macaque)


Papio anubis (Olive baboon)



Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)



Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Anolis carolinensis (green anole)

51 genes

Compare expression
Tetrapoda

29 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)


Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)

Ovis aries (Sheep)

Oryctolagus cuniculus (rabbit)

Cavia porcellus (guinea pig)

Gallus gallus (chicken)
Ornithorhynchus anatinus (platypus)
Cercocebus atys (Sooty mangabey)


Macaca fascicularis (Crab-eating macaque)






Macaca mulatta (macaque)


Macaca nemestrina (Pig-tailed macaque)


Papio anubis (Olive baboon)



Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)



Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)
Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)

53 genes

Compare expression
Sarcopterygii

30 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)


Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)

Ovis aries (Sheep)

Oryctolagus cuniculus (rabbit)

Cavia porcellus (guinea pig)

Gallus gallus (chicken)
Ornithorhynchus anatinus (platypus)
Cercocebus atys (Sooty mangabey)


Macaca fascicularis (Crab-eating macaque)






Macaca mulatta (macaque)


Macaca nemestrina (Pig-tailed macaque)


Papio anubis (Olive baboon)



Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)



Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)
Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Latimeria chalumnae (Coelacanth)

54 genes

Compare expression
Euteleostomi

43 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)





Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)


Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)

Ovis aries (Sheep)

Oryctolagus cuniculus (rabbit)

Cavia porcellus (guinea pig)

Gallus gallus (chicken)
Ornithorhynchus anatinus (platypus)
Cercocebus atys (Sooty mangabey)


Macaca fascicularis (Crab-eating macaque)






Macaca mulatta (macaque)


Macaca nemestrina (Pig-tailed macaque)


Papio anubis (Olive baboon)



Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)



Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)
Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)

Esox lucius (Northern pike)

Salmo salar (Atlantic salmon)



Gadus morhua (Atlantic cod)

Poecilia reticulata (Guppy)

Oryzias latipes (Japanese rice fish)

Astatotilapia calliptera (Eastern happy)

Neolamprologus brichardi (Fairy cichlid)

Scophthalmus maximus (Turbot)

Gasterosteus aculeatus (Three-spined stickleback)

Nothobranchius furzeri (Turquoise killifish)

Latimeria chalumnae (Coelacanth)

85 genes

ENSG00000111057 KRT18
ENSMUSG00000023043 Krt18
ENSDARG00000018404 krt18a.1
ENSDARG00000028618 krt18b
ENSDARG00000058332 krt18a.2
ENSDARG00000109528 krt18a.1
ENSDARG00000111300 krt18b
ENSDARG00000111317 krt18a.2
ENSCAFG00000007154 KRT18
ENSFCAG00000000299 KRT18
ENSECAG00000000825
ENSECAG00000002256
ENSECAG00000038379 KRT18
ENSSSCG00000000253 KRT18
ENSBTAG00000001517 KRT18
ENSCHIG00000008951 LOC102190074
ENSCHIG00000023628 KRT18
ENSOARG00000004351
ENSOARG00000016773 KRT18
ENSOCUG00000013117
ENSOCUG00000027691
ENSCPOG00000002618 Krt18
ENSCPOG00000009115
ENSGALG00000030002 KRT18
ENSOANG00000045852 KRT18
ENSCATG00000009708
ENSCATG00000010001
ENSCATG00000022351
ENSMFAG00000004761
ENSMFAG00000005730
ENSMFAG00000015166
ENSMFAG00000023704
ENSMFAG00000030362
ENSMFAG00000041139
ENSMFAG00000043037
ENSMMUG00000031911 KRT18
ENSMMUG00000043308
ENSMMUG00000059064
ENSMNEG00000010937
ENSMNEG00000037680
ENSMNEG00000037690
ENSPANG00000009632
ENSPANG00000010143
ENSPANG00000016545
ENSPANG00000020581
ENSGGOG00000010157 KRT18
ENSPPAG00000043543 KRT18
ENSPTRG00000004996 KRT18
ENSMICG00000002255
ENSCSAG00000005581
ENSCSAG00000018442
ENSCSAG00000018919
ENSCSAG00000019126
108402965 KRT18
ENSRNOG00000047393 Krt18
ENSMODG00000036454 KRT18
380504 krt18-b
ENSXETG00000020455 krt18.1
ENSACAG00000011762 KRT18
ENSLOCG00000005463 krt18b
118208531 krt18a.1
118211710 LOC118211710
ENSELUG00000011941 krt18b
ENSELUG00000012444 krt18a.1
ENSSSAG00000007948 krt18b
ENSSSAG00000064508 krt18a.1
ENSSSAG00000067593
ENSSSAG00000074296 krt18a.1
ENSGMOG00000000117 krt18a.1
ENSGMOG00000018700 krt18b
ENSPREG00000001728 krt18b
ENSPREG00000002921 krt18a.1
ENSORLG00000001481 krt18a.1
ENSORLG00000016545 krt18b
ENSACLG00000009071 krt18b
ENSACLG00000010623 krt18a.1
ENSNBRG00000015374 krt18b
ENSNBRG00000018700 krt18a.1
ENSSMAG00000005162 krt18a.1
ENSSMAG00000007716 krt18b
ENSGACG00000003800 krt18a.1
ENSGACG00000008033 krt18b
ENSNFUG00015015409 KRT18
ENSNFUG00015025107 KRT18
ENSLACG00000017551 krt18b
Compare expression
Orthology information comes from OMA : ENSCJAG00000011637.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
CallithrixCompare expression
Paralogy information comes from OMA : ENSCJAG00000011637.