Danio rerio

Gene : bmi1a - ENSDARG00000006010 - Danio rerio (zebrafish)

General information

Gene identifier

ENSDARG00000006010

Name

bmi1a

Description

bmi1 polycomb ring finger oncogene 1a [Source:NCBI gene;Acc:321505]

Synonym(s)

psc1,wu:fd18f06,pcgf4,bmi1,wu:fb17g03

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0007010cleaving embryo99.052.19e-4See source data
RSCAIE
UBERON:0000307blastula92.744.28e-10See source data
RSCAIE
UBERON:0000473testis92.502.77e-8See source data
RSCAIE
UBERON:0006860swim bladder88.461.61e-6See source data
RSCAIE
UBERON:0000992ovary88.452.41e-10See source data
RSCAIE
UBERON:0019248early embryo87.982.45e-8See source data
RSCAIE
UBERON:0000080mesonephros87.271.83e-8See source data
RSCAIE
UBERON:0001474bone element87.105.65e-9See source data
RSCAIE
UBERON:0007132head kidney86.384.61e-7See source data
RSCAIE
UBERON:0000955brain86.292.30e-5See source data
RSCAIE
UBERON:0002415tail84.221.48e-10See source data
RSCAIE
CL:0000094granulocyte83.073.39e-6See source data
RSCAIE
CL:0000586germ cell82.144.00e-4See source data
RSCAIE
UBERON:0002329somite80.313.22e-4See source data
RSCAIE
UBERON:0002107liver79.991.34e-4See source data
RSCAIE
UBERON:0000019camera-type eye79.046.95e-6See source data
RSCAIE
CL:0000015male germ cell78.574.00e-4See source data
RSCAIE
UBERON:0003059presomitic mesoderm78.264.02e-4See source data
RSCAIE
UBERON:0003982mature ovarian follicle78.202.93e-4See source data
RSCAIE
UBERON:4000164caudal fin78.143.86e-4See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

  • Affymetrix data: Bgee
  • in situ hybridization data: ZFIN
  • RNA-Seq data: Bgee

Sources of raw data:

Reported absence of expression

Show

entries

No reported absence of expression for this gene

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Clupeocephala

10 species

Esox lucius (Northern pike)

Salmo salar (Atlantic salmon)


Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Teleostei

11 species

Anguilla anguilla (European freshwater eel)
Esox lucius (Northern pike)

Salmo salar (Atlantic salmon)


Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Neopterygii

12 species

Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Esox lucius (Northern pike)

Salmo salar (Atlantic salmon)


Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Euteleostomi

44 species

Homo sapiens (human)


Mus musculus (mouse)

Canis lupus familiaris (dog)

Felis catus (cat)
Equus caballus (horse)

Sus scrofa (pig)

Bos taurus (cattle)

Capra hircus (Goat)

Ovis aries (Sheep)

Oryctolagus cuniculus (rabbit)

Cavia porcellus (guinea pig)

Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)

Ornithorhynchus anatinus (platypus)

Callithrix jacchus (White-tufted-ear marmoset)

Cercocebus atys (Sooty mangabey)

Macaca fascicularis (Crab-eating macaque)

Macaca mulatta (macaque)

Macaca nemestrina (Pig-tailed macaque)

Papio anubis (Olive baboon)

Gorilla gorilla (gorilla)

Pan paniscus (bonobo)

Pan troglodytes (chimpanzee)

Microcebus murinus (Gray mouse lemur)

Chlorocebus sabaeus (Green monkey)

Manis javanica (Malayan pangolin)

Rattus norvegicus (rat)

Monodelphis domestica (opossum)

Xenopus laevis (African clawed frog)


Xenopus tropicalis (western clawed frog)

Anolis carolinensis (green anole)

Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Esox lucius (Northern pike)

Salmo salar (Atlantic salmon)


Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Latimeria chalumnae (Coelacanth)

79 genes

ENSG00000168283 BMI1
ENSG00000269897 COMMD3-BMI1
ENSG00000277258 PCGF2
ENSMUSG00000018537 Pcgf2
ENSMUSG00000026739 Bmi1
ENSCAFG00000004164 BMI1
ENSCAFG00000016546 PCGF2
ENSFCAG00000036566 BMI1
ENSECAG00000007453 PCGF2
ENSECAG00000019529 LOC102148742
ENSSSCG00000011081 BMI1
ENSSSCG00000039198 PCGF2
ENSBTAG00000011539 PCGF2
ENSBTAG00000015584 BMI1
ENSCHIG00000016716 BMI1
ENSCHIG00000018902 PCGF2
ENSOARG00000001463 BMI1
ENSOARG00000009763 PCGF2
ENSOCUG00000005420 BMI1
ENSOCUG00000026783 PCGF2
ENSCPOG00000027284 PCGF2
ENSCPOG00000040651
ENSGALG00000041267 BMI1
ENSMGAG00000000714 PCGF2
ENSMGAG00000002917
ENSOANG00000037264 PCGF2
ENSOANG00000043686 BMI1
ENSCJAG00000008215 PCGF2
ENSCJAG00000036548 BMI1
ENSCATG00000031546 COMMD3-BMI1
ENSCATG00000042025 PCGF2
ENSMFAG00000038107 BMI1
ENSMFAG00000038330 PCGF2
ENSMMUG00000000881 COMMD3
ENSMMUG00000052879 PCGF2
ENSMNEG00000028848 PCGF2
ENSMNEG00000033368 BMI1
ENSPANG00000022022 PCGF2
ENSPANG00000023104 COMMD3-BMI1
ENSGGOG00000007987 PCGF2
ENSGGOG00000025243
ENSPPAG00000034911
ENSPPAG00000038230 PCGF2
ENSPTRG00000009074 PCGF2
ENSPTRG00000045156 BMI1
ENSMICG00000002994 PCGF2
ENSMICG00000011137 COMMD3-BMI1
ENSCSAG00000002646 PCGF2
ENSCSAG00000012472 COMMD3-BMI1
108386714 PCGF2
108396421 BMI1
ENSRNOG00000012705 Pcgf2
ENSRNOG00000016585 Bmi1
ENSMODG00000009085
ENSMODG00000012607 PCGF2
414470 pcgf2.S
414708 pcgf2.L
494698 bmi1b
ENSXETG00000007387 bmi1
ENSXETG00000014746 pcgf2
ENSACAG00000013234 PCGF2
ENSACAG00000023169 LOC100567594
ENSLOCG00000011803 bmi1a
118224638 bmi1a
ENSELUG00000010894 commd3
ENSELUG00000017194 bmi1b
ENSSSAG00000049831 bmi1b
ENSSSAG00000071617 bmi1a
ENSSSAG00000080109 bmi1a
ENSGMOG00000014319 bmi1a
ENSPREG00000015050 bmi1a
ENSORLG00000007215 bmi1a
ENSACLG00000022098 bmi1a
ENSNBRG00000002838 bmi1a
ENSSMAG00000018463 bmi1a
ENSGACG00000002494 bmi1a
ENSNFUG00015010569 bmi1a
ENSLACG00000006054 PCGF2
ENSLACG00000010214 bmi1a
Compare expression
Orthology information comes from OMA : ENSDARG00000006010.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Otophysi

1 gene

Compare expression
Paralogy information comes from OMA : ENSDARG00000006010.

Cross-references