Danio rerio

Gene : tsc22d3 - ENSDARG00000075666 - Danio rerio (zebrafish)

General information

Gene identifier

ENSDARG00000075666

Name

tsc22d3

Description

TSC22 domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1433]

Synonym(s)

gilz,zgc:65831,zgc:77028

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000206pharyngeal gill99.39<= 1.00e-14See source data
RSCAIE
CL:0000094granulocyte99.318.45e-14See source data
RSCAIE
UBERON:0002385muscle tissue98.54<= 1.00e-14See source data
RSCAIE
UBERON:0001474bone element98.28<= 1.00e-14See source data
RSCAIE
UBERON:0000014zone of skin97.974.17e-13See source data
RSCAIE
UBERON:0000160intestine97.911.55e-11See source data
RSCAIE
UBERON:0002106spleen97.142.38e-10See source data
RSCAIE
UBERON:0000080mesonephros95.881.31e-12See source data
RSCAIE
UBERON:0002107liver95.759.72e-14See source data
RSCAIE
UBERON:0007132head kidney95.252.10e-12See source data
RSCAIE
UBERON:0000948heart95.023.34e-12See source data
RSCAIE
UBERON:0006860swim bladder93.507.95e-13See source data
RSCAIE
UBERON:0000473testis92.539.14e-9See source data
RSCAIE
UBERON:0000955brain91.661.32e-9See source data
RSCAIE
UBERON:0002548larva90.582.00e-11See source data
RSCAIE
UBERON:0002082cardiac ventricle85.803.88e-4See source data
RSCAIE
UBERON:0002415tail85.312.57e-10See source data
RSCAIE
UBERON:0000033head82.667.90e-13See source data
RSCAIE
UBERON:4000164caudal fin80.127.77e-4See source data
RSCAIE
UBERON:0000019camera-type eye75.544.91e-5See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0007010cleaving embryo42.250.824See source data
RSCAIE
UBERON:0003982mature ovarian follicle51.710.118See source data
RSCAIE
UBERON:0003059presomitic mesoderm52.960.752See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Otophysi

1 species

Astyanax mexicanus (Blind cave fish)

1 gene

Compare expression
Clupeocephala

8 species

Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Teleostei

9 species

Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Neopterygii

10 species

Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Euteleostomi

32 species

Homo sapiens (human)
Mus musculus (mouse)
Felis catus (cat)
Sus scrofa (pig)
Capra hircus (Goat)
Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Nothobranchius furzeri (Turquoise killifish)
Latimeria chalumnae (Coelacanth)

34 genes

Compare expression
Orthology information comes from OMA : ENSDARG00000075666.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Danio

1 gene

Compare expression
Paralogy information comes from OMA : ENSDARG00000075666.

Cross-references