Danio rerio

Gene : cfap100 - ENSDARG00000111474 - Danio rerio (zebrafish)

General information

Gene identifier

ENSDARG00000111474

Name

cfap100

Description

cilia and flagella associated protein 100 [Source:ZFIN;Acc:ZDB-GENE-060929-352]

Synonym(s)

ccdc37,zgc:153139

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0004734gastrula66.534.24e-5See source data
RSCAIE
UBERON:0006860swim bladder65.170.002See source data
RSCAIE
UBERON:0000307blastula57.842.19e-5See source data
RSCAIE
UBERON:0000080mesonephros56.971.20e-4See source data
RSCAIE
UBERON:0007132head kidney56.010.004See source data
RSCAIE
UBERON:0000014zone of skin50.154.02e-4See source data
RSCAIE
UBERON:0000955brain48.690.019See source data
RSCAIE
UBERON:0019248early embryo47.650.007See source data
RSCAIE
UBERON:0001474bone element41.595.83e-4See source data
RSCAIE
CL:0000094granulocyte38.320.037See source data
RSCAIE
UBERON:0000992ovary36.990.015See source data
RSCAIE
UBERON:0002415tail35.210.007See source data
RSCAIE
UBERON:0000033head35.160.043See source data
RSCAIE
UBERON:0000473testis34.150.01See source data
RSCAIE
UBERON:0002548larva31.080.011See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0002385muscle tissue17.930.396See source data
RSCAIE
UBERON:0000160intestine22.220.438See source data
RSCAIE
UBERON:0002106spleen23.040.53See source data
RSCAIE
UBERON:0003982mature ovarian follicle23.471See source data
RSCAIE
UBERON:0000948heart23.521See source data
RSCAIE
UBERON:0000966retina23.820.994See source data
RSCAIE
UBERON:0000206pharyngeal gill26.390.081See source data
RSCAIE
UBERON:0002107liver33.820.664See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Otophysi

1 species

Astyanax mexicanus (Blind cave fish)

1 gene

Compare expression
Clupeocephala

6 species

Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)


Gadus morhua (Atlantic cod)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Compare expression
Teleostei

7 species

Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)


Gadus morhua (Atlantic cod)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Compare expression
Euteleostomi

37 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Xenopus laevis (African clawed frog)
Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)


Gadus morhua (Atlantic cod)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Latimeria chalumnae (Coelacanth)

39 genes

Compare expression
Orthology information comes from OMA : ENSDARG00000111474.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Danio

1 gene

Compare expression
Paralogy information comes from OMA : ENSDARG00000111474.

Cross-references

Ensembl

ZFIN

UniProtKB/TrEMBL