Gene : OPTC - ENSECAG00000018151 - Equus caballus (horse)
General information
Gene identifier
ENSECAG00000018151
Name
OPTC
Description
opticin [Source:VGNC Symbol;Acc:VGNC:21046]
Organism
Synonym(s)
Orthologs
Expression
Show
entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| UBERON:0000966retina | 60.16 | 3.60e-5 | See source data | |
| UBERON:0002371bone marrow | 56.02 | 1.10e-5 | See source data | |
| UBERON:0000451prefrontal cortex | 49.25 | 2.76e-5 | See source data | |
| UBERON:0004345trophectoderm | 45.92 | 0.042 | See source data | |
| UBERON:0002037cerebellum | 42.94 | 8.48e-5 | See source data | |
| UBERON:0002018synovial membrane of synovial joint | 40.89 | 2.63e-4 | See source data | |
| UBERON:0000087inner cell mass | 37.64 | 0.03 | See source data | |
| UBERON:0001295endometrium | 31.47 | 0.003 | See source data | |
| UBERON:0000473testis | 29.27 | 0.003 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Reported absence of expression
Show
entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| UBERON:0000082adult mammalian kidney | 15.24 | 0.654 | See source data | |
| UBERON:0002385muscle tissue | 17.25 | 1 | See source data | |
| UBERON:0001509triceps brachii | 19.16 | 1 | See source data | |
| UBERON:0004804oviduct epithelium | 19.56 | 1 | See source data | |
| UBERON:0002031epithelium of bronchus | 20.50 | 0.215 | See source data | |
| UBERON:0007106chorionic villus | 21.15 | 0.112 | See source data | |
| UBERON:0000178blood | 22.34 | 1 | See source data | |
| UBERON:0001371gluteus medius | 22.90 | 1 | See source data | |
| CL:0000738leukocyte | 23.61 | 0.731 | See source data | |
| UBERON:0002107liver | 23.63 | 0.439 | See source data | |
| UBERON:0010996articular cartilage of joint | 28.14 | 0.074 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Orthologs
Taxon Name | Species with orthologs | Gene(s) | Expression comparison | See details |
|---|---|---|---|---|
| Laurasiatheria | 7 species | 7 genes | Compare expression | |
| Boreoeutheria | 23 species | 23 genes | Compare expression | |
| Theria | 24 species | 24 genes | Compare expression | |
| Amniota | 27 species | 27 genes | Compare expression | |
| Tetrapoda | 29 species | 29 genes | Compare expression | |
| Sarcopterygii | 30 species | 30 genes | Compare expression |
Cross-references
Ensembl
UniProtKB/TrEMBL
VGNC