Gene : OPTC - ENSG00000188770 - Homo sapiens (human)
General information
Gene identifier
ENSG00000188770
Name
OPTC
Description
opticin [Source:HGNC Symbol;Acc:HGNC:8158]
Organism
Synonym(s)
Orthologs
Expression
Show
entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| UBERON:0001385tibialis anterior | 82.09 | 0.011 | See source data | |
| UBERON:0000331ileal mucosa | 77.50 | 0.01 | See source data | |
| UBERON:0001476deltoid | 70.96 | 0.019 | See source data | |
| CL:0000670 in UBERON:0000991primordial germ cell in gonad | 55.10 | 0.006 | See source data | |
| UBERON:0001135smooth muscle tissue | 53.16 | 1.09e-4 | See source data | |
| UBERON:0001987placenta | 52.11 | 0.029 | See source data | |
| UBERON:0035805muscle layer of sigmoid colon | 50.30 | 3.98e-4 | See source data | |
| UBERON:0009853body of uterus | 50.05 | 2.17e-4 | See source data | |
| UBERON:0001296myometrium | 48.55 | 8.61e-5 | See source data | |
| UBERON:0001303left uterine tube | 48.45 | 8.61e-4 | See source data | |
| UBERON:0001255urinary bladder | 45.31 | 0.004 | See source data | |
| UBERON:0000020sense organ | 45.02 | 0.015 | See source data | |
| UBERON:0035833lower esophagus muscularis layer | 44.91 | 5.79e-5 | See source data | |
| UBERON:0001456face | 44.63 | 0.016 | See source data | |
| UBERON:0001199mucosa of stomach | 44.56 | 0.008 | See source data | |
| UBERON:0002038substantia nigra | 43.57 | 0.002 | See source data | |
| UBERON:0001871temporal lobe | 42.35 | 0.014 | See source data | |
| UBERON:0035841esophagogastric junction muscularis propria | 42.26 | 0.003 | See source data | |
| UBERON:0003516hindlimb blood vessel | 42.15 | 0.003 | See source data | |
| UBERON:0007610tibial artery | 42.14 | 0.003 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Sources of annotations to anatomy and development:
Sources of raw data:
- Affymetrix data: ArrayExpress, GEO
- single-cell RNA-Seq data: SRA
- RNA-Seq data: GEO, GTEx - dbGAP, SRA
Reported absence of expression
Show
entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| UBERON:0004991mucosa of transverse colon | 19.91 | 1 | See source data | |
| UBERON:0002098apex of heart | 20.28 | 1 | See source data | |
| CL:0000094granulocyte | 20.63 | 1 | See source data | |
| UBERON:0018303adrenal tissue | 22.06 | 0.666 | See source data | |
| UBERON:0035834lower esophagus mucosa | 22.15 | 1 | See source data | |
| UBERON:0001119right lobe of thyroid gland | 22.62 | 1 | See source data | |
| UBERON:0001830minor salivary gland | 24.24 | 0.281 | See source data | |
| UBERON:0010533metanephros cortex | 24.60 | 0.842 | See source data | |
| UBERON:0035827right adrenal gland cortex | 24.69 | 0.817 | See source data | |
| UBERON:0000029lymph node | 29.10 | 1 | See source data | |
| CL:0000576monocyte | 29.15 | 0.704 | See source data | |
| UBERON:0001302right uterine tube | 29.33 | 0.656 | See source data | |
| UBERON:0001154vermiform appendix | 29.43 | 0.267 | See source data | |
| CL:0002255stromal cell of endometrium | 29.87 | 1 | See source data | |
| UBERON:0002372tonsil | 33.17 | 1 | See source data | |
| UBERON:0002110gall bladder | 33.99 | 0.057 | See source data | |
| UBERON:0007023adult organism | 35.28 | 0.424 | See source data | |
| UBERON:0004023ganglionic eminence | 35.49 | 1 | See source data | |
| UBERON:0002336corpus callosum | 35.59 | 0.648 | See source data | |
| UBERON:0014890right hemisphere of cerebellum | 35.61 | 0.249 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Sources of raw data:
- Affymetrix data: ArrayExpress, GEO
- RNA-Seq data: GEO, GTEx - dbGAP, SRA
Orthologs
Taxon Name | Species with orthologs | Gene(s) | Expression comparison | See details |
|---|---|---|---|---|
| Homininae | 3 species | 3 genes | Compare expression | |
| Catarrhini | 9 species | 9 genes | Compare expression | |
| Simiiformes | 10 species | 10 genes | Compare expression | |
| Primates | 11 species | 11 genes | Compare expression | |
| Euarchontoglires | 15 species | 15 genes | Compare expression | |
| Boreoeutheria | 23 species | 23 genes | Compare expression | |
| Theria | 24 species | 24 genes | Compare expression | |
| Amniota | 27 species | 27 genes | Compare expression | |
| Tetrapoda | 29 species | 29 genes | Compare expression | |
| Sarcopterygii | 30 species | 30 genes | Compare expression |
Cross-references
CCDS
Ensembl
HGNC
EMBL
GeneCards
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL