Gene : PTPN3 - ENSG00000070159 - Homo sapiens (human)
General information
Gene identifier
ENSG00000070159
Name
PTPN3
Description
protein tyrosine phosphatase non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
Organism
Synonym(s)
Orthologs
Paralogs
Expression
Show
entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| CL:0000023oocyte | 96.95 | 0.002 | See source data | |
| UBERON:0004511skeletal muscle tissue of rectus abdominis | 96.24 | 0.002 | See source data | |
| CL:0000655secondary oocyte | 96.20 | 0.002 | See source data | |
| UBERON:0001509triceps brachii | 95.58 | 0.002 | See source data | |
| UBERON:0002000gluteal muscle | 95.32 | 0.002 | See source data | |
| UBERON:0035834lower esophagus mucosa | 95.26 | 2.11e-14 | See source data | |
| UBERON:0004252hindlimb stylopod muscle | 95.15 | <= 1.00e-14 | See source data | |
| UBERON:0001103diaphragm | 95.04 | 0.002 | See source data | |
| UBERON:0002736lateral nuclear group of thalamus | 94.77 | 0.002 | See source data | |
| UBERON:0001388gastrocnemius | 93.91 | <= 1.00e-14 | See source data | |
| UBERON:0001507biceps brachii | 93.82 | 0.002 | See source data | |
| UBERON:0002098apex of heart | 93.77 | <= 1.00e-14 | See source data | |
| UBERON:0001379vastus lateralis | 93.30 | 0.004 | See source data | |
| UBERON:0001114right lobe of liver | 92.81 | <= 1.00e-14 | See source data | |
| UBERON:0004502skeletal muscle tissue of biceps brachii | 92.80 | 0.002 | See source data | |
| UBERON:0010533metanephros cortex | 92.34 | <= 1.00e-14 | See source data | |
| UBERON:0000173amniotic fluid | 92.17 | 0.002 | See source data | |
| UBERON:0005384nasal cavity epithelium | 91.75 | 0.005 | See source data | |
| UBERON:0004359corpus epididymis | 91.70 | 0.002 | See source data | |
| UBERON:0004263upper arm skin | 91.32 | 0.004 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Reported absence of expression
Show
entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| CL:0002255stromal cell of endometrium | 29.87 | 1 | See source data | |
| CL:0000094granulocyte | 36.61 | 0.343 | See source data | |
| UBERON:0002127inferior olivary complex | 45.14 | 0.426 | See source data | |
| UBERON:0002870dorsal motor nucleus of vagus nerve | 45.35 | 0.945 | See source data | |
| UBERON:0008266periodontal ligament | 47.14 | 0.535 | See source data | |
| UBERON:0002477medial globus pallidus | 47.41 | 0.935 | See source data | |
| UBERON:0000941cranial nerve II | 48.81 | 0.1 | See source data | |
| UBERON:0015488sural nerve | 48.94 | 0.321 | See source data | |
| CL:0002092bone marrow cell | 50.71 | 0.227 | See source data | |
| UBERON:0002702middle frontal gyrus | 58.88 | 0.951 | See source data | |
| UBERON:0003911choroid plexus epithelium | 61.84 | 0.101 | See source data | |
| UBERON:0001614superficial temporal artery | 61.96 | 0.923 | See source data | |
| UBERON:0008188tendon of biceps brachii | 62.87 | 0.328 | See source data | |
| CL:0000115endothelial cell | 64.05 | 0.429 | See source data | |
| UBERON:0004720cerebellar vermis | 68.56 | 0.141 | See source data | |
| UBERON:0006922cervix squamous epithelium | 69.70 | 0.467 | See source data | |
| UBERON:0007227superior vestibular nucleus | 69.99 | 0.5 | See source data | |
| UBERON:0002264olfactory bulb | 70.60 | 0.975 | See source data | |
| UBERON:0005363inferior vagus X ganglion | 70.75 | 0.813 | See source data | |
| UBERON:0000988pons | 71.44 | 0.733 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Sources of raw data:
- Affymetrix data: ArrayExpress, GEO
- RNA-Seq data: GEO, GTEx - dbGAP, SRA
Orthologs
Taxon Name | Species with orthologs | Gene(s) | Expression comparison | See details |
|---|---|---|---|---|
| Homininae | 3 species | 3 genes | Compare expression | |
| Catarrhini | 9 species | 9 genes | Compare expression | |
| Simiiformes | 10 species | 10 genes | Compare expression | |
| Primates | 11 species | 11 genes | Compare expression | |
| Euarchontoglires | 15 species | 15 genes | Compare expression | |
| Boreoeutheria | 23 species | 23 genes | Compare expression | |
| Theria | 24 species | 24 genes | Compare expression | |
| Mammalia | 25 species | 25 genes | Compare expression | |
| Amniota | 28 species | 28 genes | Compare expression | |
| Tetrapoda | 30 species | 30 genes | Compare expression | |
| Sarcopterygii | 31 species | 31 genes | Compare expression | |
| Euteleostomi | 44 species | 45 genes | Compare expression |
Paralogs (same species)
Taxon Name | Gene(s) | Expression comparison | See details |
|---|---|---|---|
| Bilateria | 1 gene | Compare expression |
Cross-references
CCDS
Ensembl
HGNC
EMBL
GeneCards
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL