Homo sapiens

Gene : CALCA - ENSG00000110680 - Homo sapiens (human)

General information

Gene identifier

ENSG00000110680

Name

CALCA

Description

calcitonin related polypeptide alpha [Source:HGNC Symbol;Acc:HGNC:1437]

Synonym(s)

cgrp-alpha,calc1,cgrp

Orthologs

Paralogs

Expression

80%

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0001302right uterine tube16.491See source data
RSCAIE
UBERON:0004991mucosa of transverse colon19.911See source data
RSCAIE
UBERON:0018303adrenal tissue24.011See source data
RSCAIE
CL:0002255stromal cell of endometrium29.871See source data
RSCAIE
UBERON:0004023ganglionic eminence35.491See source data
RSCAIE
UBERON:0005343cortical plate36.471See source data
RSCAIE
UBERON:0003053ventricular zone36.481See source data
RSCAIE
UBERON:0004262upper leg skin38.600.1See source data
RSCAIE
CL:0000094granulocyte38.610.211See source data
RSCAIE
CL:0000019sperm39.450.516See source data
RSCAIE
UBERON:0003701calcaneal tendon40.060.234See source data
RSCAIE
UBERON:0001949gingival epithelium40.430.813See source data
RSCAIE
UBERON:0002336corpus callosum41.580.319See source data
RSCAIE
UBERON:0000998seminal vesicle42.020.318See source data
RSCAIE
CL:0000655secondary oocyte42.570.571See source data
RSCAIE
UBERON:0000397colonic epithelium42.770.187See source data
RSCAIE
UBERON:0002372tonsil42.800.319See source data
RSCAIE
CL:0002092bone marrow cell46.090.799See source data
RSCAIE
UBERON:0001259mucosa of urinary bladder47.800.465See source data
RSCAIE
UBERON:0004263upper arm skin48.060.703See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Homininae

3 species

Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Compare expression
Catarrhini

6 species

Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca nemestrina (Pig-tailed macaque)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Compare expression
Simiiformes

7 species

Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca nemestrina (Pig-tailed macaque)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Compare expression
Euarchontoglires

11 species

Mus musculus (mouse)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)

Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca nemestrina (Pig-tailed macaque)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Rattus norvegicus (rat)
Compare expression
Boreoeutheria

18 species

Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)

Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca nemestrina (Pig-tailed macaque)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Compare expression
Euteleostomi

27 species

Mus musculus (mouse)
Danio rerio (zebrafish)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)

Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca nemestrina (Pig-tailed macaque)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Esox lucius (Northern pike)

Salmo salar (Atlantic salmon)


Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)

Scophthalmus maximus (Turbot)

Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)

34 genes

Compare expression
Orthology information comes from OMA : ENSG00000110680.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Simiiformes

1 gene

Compare expression
Paralogy information comes from OMA : ENSG00000110680.

Cross-references

CCDS

CCDS31432 (CCDS31432.1),CCDS7819 (CCDS7819.1)

Ensembl

HGNC

HGNC:1437 (CALCA)

UniProtKB/Swiss-Prot