Gene : BARHL1 - ENSG00000125492 - Homo sapiens (human)
General information
Gene identifier
ENSG00000125492
Name
BARHL1
Description
BarH like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:953]
Organism
Synonym(s)
Orthologs
Expression
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entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| CL:0000089 in UBERON:0000473male germ line stem cell (sensu Vertebrata) in testis | 97.39 | 0.013 | See source data | |
| UBERON:0002245cerebellar hemisphere | 85.73 | 2.32e-10 | See source data | |
| UBERON:0014890right hemisphere of cerebellum | 84.78 | 1.83e-10 | See source data | |
| UBERON:0004720cerebellar vermis | 65.73 | 0.025 | See source data | |
| UBERON:0000988pons | 61.62 | 0.006 | See source data | |
| UBERON:0007227superior vestibular nucleus | 56.90 | 0.049 | See source data | |
| UBERON:0001965substantia nigra pars compacta | 56.87 | 0.041 | See source data | |
| UBERON:0002240spinal cord | 43.33 | 2.15e-6 | See source data | |
| UBERON:0006469C1 segment of cervical spinal cord | 42.53 | 1.77e-6 | See source data | |
| UBERON:0001898hypothalamus | 42.04 | 8.53e-7 | See source data | |
| UBERON:0000006islet of Langerhans | 35.68 | 0.004 | See source data | |
| UBERON:0005401cerebral hemisphere gray matter | 30.98 | 9.75e-8 | See source data | |
| UBERON:0002416integumental system | 30.95 | 1.14e-7 | See source data | |
| UBERON:0000956cerebral cortex | 30.76 | 8.98e-8 | See source data | |
| UBERON:0001870frontal cortex | 30.40 | 3.27e-8 | See source data | |
| UBERON:0000014zone of skin | 28.77 | 5.30e-8 | See source data | |
| UBERON:0002101limb | 27.60 | 9.28e-8 | See source data | |
| UBERON:0002103hindlimb | 27.12 | 9.05e-8 | See source data | |
| UBERON:0009834dorsolateral prefrontal cortex | 26.48 | 4.22e-7 | See source data | |
| UBERON:0000978leg | 26.11 | 6.84e-8 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Sources of annotations to anatomy and development:
Sources of raw data:
- Affymetrix data: ArrayExpress, GEO
- single-cell RNA-Seq data: SRA
- RNA-Seq data: GEO, GTEx - dbGAP, SRA
Reported absence of expression
Show
entries
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Sources of raw data:
- Affymetrix data: ArrayExpress, GEO
- RNA-Seq data: GEO, GTEx - dbGAP, SRA
Orthologs
Taxon Name | Species with orthologs | Gene(s) | Expression comparison | See details |
|---|---|---|---|---|
| Homininae | 3 species | 3 genes | Compare expression | |
| Catarrhini | 9 species | 9 genes | Compare expression | |
| Simiiformes | 10 species | 10 genes | Compare expression | |
| Euarchontoglires | 14 species | 14 genes | Compare expression | |
| Boreoeutheria | 22 species | 22 genes | Compare expression | |
| Theria | 23 species | 23 genes | Compare expression | |
| Mammalia | 24 species | 24 genes | Compare expression | |
| Amniota | 25 species | 25 genes | Compare expression | |
| Tetrapoda | 27 species | 28 genes | Compare expression | |
| Sarcopterygii | 28 species | 29 genes | Compare expression | |
| Euteleostomi | 40 species | 44 genes | Compare expression |
Cross-references
CCDS
Ensembl
HGNC
EMBL
GeneCards
UniProtKB/Swiss-Prot