Gene : COL6A2 - ENSG00000142173 - Homo sapiens (human)
General information
Gene identifier
ENSG00000142173
Name
COL6A2
Description
collagen type VI alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2212]
Organism
Synonym(s)
Orthologs
Expression
Reported absence of expression
Show
entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| CL:0000115endothelial cell | 39.75 | 0.954 | See source data | |
| UBERON:0001812palpebral conjunctiva | 43.35 | 0.494 | See source data | |
| CL:0002336buccal mucosa cell | 46.21 | 0.5 | See source data | |
| UBERON:0004811endometrium epithelium | 46.85 | 0.983 | See source data | |
| UBERON:0003881CA1 field of hippocampus | 48.50 | 0.756 | See source data | |
| CL:0000019sperm | 48.59 | 0.703 | See source data | |
| UBERON:0003911choroid plexus epithelium | 48.89 | 0.365 | See source data | |
| UBERON:0001231nephron tubule | 48.92 | 0.597 | See source data | |
| UBERON:0005351paraflocculus | 50.18 | 0.981 | See source data | |
| UBERON:0013541Brodmann (1909) area 10 | 50.18 | 0.996 | See source data | |
| UBERON:0002702middle frontal gyrus | 50.30 | 0.961 | See source data | |
| UBERON:0002795frontal pole | 50.41 | 0.893 | See source data | |
| UBERON:0002477medial globus pallidus | 56.13 | 0.297 | See source data | |
| UBERON:0005384nasal cavity epithelium | 56.35 | 0.729 | See source data | |
| UBERON:0002771middle temporal gyrus | 58.08 | 0.395 | See source data | |
| UBERON:0001951epithelium of nasopharynx | 59.97 | 0.155 | See source data | |
| CL:0000655secondary oocyte | 62.94 | 0.571 | See source data | |
| UBERON:0004167orbitofrontal cortex | 63.78 | 0.206 | See source data | |
| UBERON:0006919tongue squamous epithelium | 63.94 | 0.605 | See source data | |
| UBERON:0004720cerebellar vermis | 65.56 | 0.426 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Sources of annotations to anatomy and development:
- Affymetrix data: Bgee
Sources of raw data:
- Affymetrix data: ArrayExpress, GEO
Orthologs
Taxon Name | Species with orthologs | Gene(s) | Expression comparison | See details |
|---|---|---|---|---|
| Homininae | 2 species | 2 genes | Compare expression | |
| Catarrhini | 8 species | 8 genes | Compare expression | |
| Simiiformes | 9 species | 9 genes | Compare expression | |
| Euarchontoglires | 13 species | 13 genes | Compare expression | |
| Boreoeutheria | 20 species | 20 genes | Compare expression | |
| Mammalia | 21 species | 21 genes | Compare expression | |
| Amniota | 24 species | 24 genes | Compare expression | |
| Tetrapoda | 26 species | 27 genes | Compare expression | |
| Sarcopterygii | 27 species | 28 genes | Compare expression | |
| Euteleostomi | 40 species | 42 genes | Compare expression |
Cross-references
CCDS
Ensembl
HGNC
EMBL
GeneCards
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL