Gene : SHH - ENSG00000164690 - Homo sapiens (human)
General information
Gene identifier
ENSG00000164690
Name
SHH
Description
sonic hedgehog signaling molecule [Source:HGNC Symbol;Acc:HGNC:10848]
Organism
Synonym(s)
Orthologs
Paralogs
Expression
Reported absence of expression
Show
entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| UBERON:0002098apex of heart | 20.28 | 1 | See source data | |
| UBERON:0001119right lobe of thyroid gland | 26.80 | 0.787 | See source data | |
| UBERON:0001120left lobe of thyroid gland | 27.04 | 1 | See source data | |
| UBERON:0002345descending thoracic aorta | 27.20 | 0.965 | See source data | |
| UBERON:0012249ectocervix | 27.23 | 0.673 | See source data | |
| UBERON:0006631right atrium auricular region | 28.29 | 0.374 | See source data | |
| UBERON:0001302right uterine tube | 28.31 | 0.938 | See source data | |
| UBERON:0003701calcaneal tendon | 28.50 | 1 | See source data | |
| UBERON:0002118right ovary | 28.76 | 0.941 | See source data | |
| UBERON:0010414omental fat pad | 28.83 | 0.882 | See source data | |
| UBERON:0001496ascending aorta | 30.34 | 0.393 | See source data | |
| UBERON:0001303left uterine tube | 32.53 | 0.194 | See source data | |
| UBERON:0001625right coronary artery | 36.22 | 0.111 | See source data | |
| UBERON:0003053ventricular zone | 36.48 | 1 | See source data | |
| CL:0000576monocyte | 37.33 | 0.078 | See source data | |
| UBERON:0035834lower esophagus mucosa | 37.81 | 0.367 | See source data | |
| UBERON:0002400parietal pleura | 39.45 | 0.672 | See source data | |
| CL:0000094granulocyte | 40.11 | 0.137 | See source data | |
| UBERON:0001304germinal epithelium of ovary | 40.33 | 0.969 | See source data | |
| UBERON:0004023ganglionic eminence | 40.45 | 1 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Sources of raw data:
- Affymetrix data: ArrayExpress, GEO
- RNA-Seq data: GEO, GTEx - dbGAP, SRA
Orthologs
Taxon Name | Species with orthologs | Gene(s) | Expression comparison | See details |
|---|---|---|---|---|
| Homininae | 3 species | 3 genes | Compare expression | |
| Catarrhini | 9 species | 9 genes | Compare expression | |
| Simiiformes | 10 species | 10 genes | Compare expression | |
| Euarchontoglires | 14 species | 14 genes | Compare expression | |
| Boreoeutheria | 21 species | 21 genes | Compare expression | |
| Theria | 22 species | 22 genes | Compare expression | |
| Mammalia | 23 species | 23 genes | Compare expression | |
| Amniota | 25 species | 25 genes | Compare expression | |
| Tetrapoda | 26 species | 27 genes | Compare expression | |
| Sarcopterygii | 27 species | 28 genes | Compare expression | |
| Euteleostomi | 40 species | 43 genes | Compare expression |
Paralogs (same species)
Taxon Name | Gene(s) | Expression comparison | See details |
|---|---|---|---|
| Vertebrata | 2 genes | Compare expression |
Cross-references
CCDS
Ensembl
HGNC
EMBL
GeneCards
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL