Gene : Hoxb5 - ENSMUSG00000038700 - Mus musculus (mouse)
General information
Gene identifier
ENSMUSG00000038700
Name
Hoxb5
Description
homeobox B5 [Source:MGI Symbol;Acc:MGI:96186]
Organism
Synonym(s)
Orthologs
Expression graph
Expression table
Show
entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| UBERON:0005363inferior vagus X ganglion | 94.45 | 4.00e-4 | See source data | |
| CL:0000100motor neuron | 93.30 | 0.003 | See source data | |
| UBERON:0009478associated mesenchyme of midgut | 89.06 | 0.002 | See source data | |
| UBERON:0011094vertebra cartilage element | 88.70 | 4.47e-4 | See source data | |
| UBERON:0005080metanephric ureteric bud | 87.86 | 0.002 | See source data | |
| UBERON:0002257ventral horn of spinal cord | 86.88 | 0.002 | See source data | |
| CL:0002607migratory enteric neural crest cell | 85.82 | 0.002 | See source data | |
| UBERON:0006073thoracic region of vertebral column | 85.71 | 4.00e-4 | See source data | |
| UBERON:0004883lung mesenchyme | 85.47 | 4.00e-4 | See source data | |
| UBERON:0006364ureteric bud tip | 84.24 | 8.00e-4 | See source data | |
| UBERON:0005130metanephric loop of Henle | 84.04 | 0.004 | See source data | |
| UBERON:0002151pontine nuclear group | 83.99 | 0.002 | See source data | |
| UBERON:0004737metanephric collecting duct | 83.99 | 0.004 | See source data | |
| UBERON:0003220metanephric mesenchyme | 83.39 | 0.003 | See source data | |
| UBERON:0013507thoracic vertebra cartilage element | 83.33 | 4.00e-4 | See source data | |
| UBERON:0007144embryonic post-anal tail | 83.30 | 1.46e-6 | See source data | |
| UBERON:0005147metanephric renal vesicle | 82.76 | 0.003 | See source data | |
| UBERON:0013505cervical vertebra cartilage element | 80.94 | 5.33e-4 | See source data | |
| UBERON:0005185renal medulla collecting duct | 80.86 | 0.003 | See source data | |
| UBERON:0005115metanephric cortical collecting duct | 80.47 | 0.004 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Reported absence of expression
Show
entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| UBERON:0001833lip | 18.34 | 1 | See source data | |
| UBERON:0003902retinal neural layer | 21.48 | 1 | See source data | |
| CL:0000018spermatid | 23.40 | 0.63 | See source data | |
| UBERON:0004024medial ganglionic eminence | 27.50 | 0.1 | See source data | |
| UBERON:0005343cortical plate | 27.52 | 1 | See source data | |
| UBERON:0003053ventricular zone | 27.84 | 1 | See source data | |
| UBERON:0004734gastrula | 29.95 | 0.1 | See source data | |
| UBERON:0002532epiblast (generic) | 30.75 | 0.912 | See source data | |
| UBERON:0000965lens of camera-type eye | 30.76 | 1 | See source data | |
| UBERON:0002264olfactory bulb | 31.32 | 1 | See source data | |
| UBERON:0002370thymus | 31.86 | 0.45 | See source data | |
| CL:0000017spermatocyte | 32.07 | 0.312 | See source data | |
| UBERON:0001598temporalis muscle | 32.48 | 0.1 | See source data | |
| CL:2000089dentate gyrus of hippocampal formation granule cell | 32.57 | 1 | See source data | |
| UBERON:0002661superior frontal gyrus | 34.63 | 0.647 | See source data | |
| UBERON:0001128sternocleidomastoid | 34.70 | 0.1 | See source data | |
| UBERON:0001343seminiferous tubule of testis | 35.41 | 0.984 | See source data | |
| UBERON:0001775ciliary body | 35.62 | 0.998 | See source data | |
| UBERON:0001562digastric muscle group | 35.78 | 0.1 | See source data | |
| UBERON:0001817lacrimal gland | 35.98 | 0.962 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Orthologs
Taxon Name | Species with orthologs | Gene(s) | Expression comparison | See details |
|---|---|---|---|---|
| Murinae | 1 species | 1 gene | Compare expression | |
| Rodentia | 2 species | 2 genes | Compare expression | |
| Glires | 3 species | 3 genes | Compare expression | |
| Euarchontoglires | 14 species | 14 genes | Compare expression | |
| Boreoeutheria | 22 species | 22 genes | Compare expression | |
| Theria | 23 species | 23 genes | Compare expression | |
| Mammalia | 24 species | 24 genes | Compare expression | |
| Amniota | 27 species | 27 genes | Compare expression | |
| Tetrapoda | 29 species | 29 genes | Compare expression | |
| Euteleostomi | 32 species | 33 genes | Compare expression |
Cross-references
CCDS
Ensembl
MGI
EMBL
UniProtKB/Swiss-Prot