Search Genes

Gene : ALYREF - ENSORLG00000012331 - Oryzias latipes (Japanese rice fish)

General information

Expressed in blastula and 14 other cell types or tissues.

Gene identifier

ENSORLG00000012331

Name

ALYREF

Description

THO complex subunit 4 [Source:NCBI gene;Acc:101161973]

Organism

Oryzias latipes (Japanese rice fish)

Synonym(s)

Orthologs

51 orthologs

Paralogs

149 paralogs

Source data

Retrieve all processed expression values for that gene

Expression graph

80%

Expression table

80%

Reported absence of expression

80%

Orthologs

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Taxon Name	Species with orthologs	Gene(s)	Expression comparison
Atherinomorphae	2 species Poecilia reticulata (Guppy) Nothobranchius furzeri (Turquoise killifish)	2 genes ENSPREG00000015795 alyref ENSNFUG00015019366 alyref	Compare expression
Ovalentaria	4 species Poecilia reticulata (Guppy) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Nothobranchius furzeri (Turquoise killifish)	4 genes ENSPREG00000015795 alyref ENSACLG00000008432 alyref ENSNBRG00000001747 alyref ENSNFUG00015019366 alyref	Compare expression
Percomorphaceae	6 species Poecilia reticulata (Guppy) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	6 genes ENSPREG00000015795 alyref ENSACLG00000008432 alyref ENSNBRG00000001747 alyref ENSSMAG00000009283 alyref ENSGACG00000013328 ALYREF ENSNFUG00015019366 alyref	Compare expression
Acanthomorphata	7 species Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	7 genes ENSGMOG00000009882 alyref ENSPREG00000015795 alyref ENSACLG00000008432 alyref ENSNBRG00000001747 alyref ENSSMAG00000009283 alyref ENSGACG00000013328 ALYREF ENSNFUG00015019366 alyref	Compare expression
Euteleosteomorpha	9 species Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	12 genes ENSELUG00000017178 alyref ENSSSAG00000001371 THOC4 ENSSSAG00000001470 THOC4 ENSSSAG00000002667 alyref ENSSSAG00000003536 ALYREF ENSGMOG00000009882 alyref ENSPREG00000015795 alyref ENSACLG00000008432 alyref ENSNBRG00000001747 alyref ENSSMAG00000009283 alyref ENSGACG00000013328 ALYREF ENSNFUG00015019366 alyref	Compare expression
Clupeocephala	11 species Danio rerio (zebrafish) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	14 genes ENSDARG00000077732 alyref ENSAMXG00000007359 alyref ENSELUG00000017178 alyref ENSSSAG00000001371 THOC4 ENSSSAG00000001470 THOC4 ENSSSAG00000002667 alyref ENSSSAG00000003536 ALYREF ENSGMOG00000009882 alyref ENSPREG00000015795 alyref ENSACLG00000008432 alyref ENSNBRG00000001747 alyref ENSSMAG00000009283 alyref ENSGACG00000013328 ALYREF ENSNFUG00015019366 alyref	Compare expression
Teleostei	12 species Danio rerio (zebrafish) Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	16 genes ENSDARG00000077732 alyref 118216059 alyref 118219637 LOC118219637 ENSAMXG00000007359 alyref ENSELUG00000017178 alyref ENSSSAG00000001371 THOC4 ENSSSAG00000001470 THOC4 ENSSSAG00000002667 alyref ENSSSAG00000003536 ALYREF ENSGMOG00000009882 alyref ENSPREG00000015795 alyref ENSACLG00000008432 alyref ENSNBRG00000001747 alyref ENSSMAG00000009283 alyref ENSGACG00000013328 ALYREF ENSNFUG00015019366 alyref	Compare expression
Neopterygii	13 species Danio rerio (zebrafish) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	17 genes ENSDARG00000077732 alyref ENSLOCG00000013879 alyref 118216059 alyref 118219637 LOC118219637 ENSAMXG00000007359 alyref ENSELUG00000017178 alyref ENSSSAG00000001371 THOC4 ENSSSAG00000001470 THOC4 ENSSSAG00000002667 alyref ENSSSAG00000003536 ALYREF ENSGMOG00000009882 alyref ENSPREG00000015795 alyref ENSACLG00000008432 alyref ENSNBRG00000001747 alyref ENSSMAG00000009283 alyref ENSGACG00000013328 ALYREF ENSNFUG00015019366 alyref	Compare expression
Euteleostomi	43 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Cavia porcellus (guinea pig) Gallus gallus (chicken) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Xenopus laevis (African clawed frog) Xenopus tropicalis (western clawed frog) Anolis carolinensis (green anole) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Latimeria chalumnae (Coelacanth)	48 genes ENSG00000183684 ALYREF ENSMUSG00000025134 Alyref ENSDARG00000077732 alyref ENSCAFG00000005877 ALYREF ENSFCAG00000022549 ALYREF ENSECAG00000018754 ALYREF ENSSSCG00000032655 ALYREF ENSBTAG00000008498 ALYREF ENSCHIG00000017396 ALYREF ENSOARG00000017932 ALYREF ENSCPOG00000013710 ALYREF ENSGALG00000007237 ALYREF ENSOANG00000043693 ALYREF ENSCJAG00000039942 ALYREF ENSCATG00000033169 ALYREF ENSMFAG00000001394 ALYREF ENSMMUG00000012884 ALYREF ENSMNEG00000043666 ALYREF ENSPANG00000019265 ALYREF ENSGGOG00000013935 ALYREF ENSPPAG00000036403 ENSPTRG00000009774 ALYREF ENSMICG00000017403 ALYREF ENSCSAG00000002216 ALYREF 108395247 ALYREF ENSRNOG00000036687 Alyref ENSMODG00000003030 ALYREF 444644 alyref-b 734364 alyref-a ENSXETG00000005391 alyref ENSACAG00000010526 ALYREF ENSLOCG00000013879 alyref 118216059 alyref 118219637 LOC118219637 ENSAMXG00000007359 alyref ENSELUG00000017178 alyref ENSSSAG00000001371 THOC4 ENSSSAG00000001470 THOC4 ENSSSAG00000002667 alyref ENSSSAG00000003536 ALYREF ENSGMOG00000009882 alyref ENSPREG00000015795 alyref ENSACLG00000008432 alyref ENSNBRG00000001747 alyref ENSSMAG00000009283 alyref ENSGACG00000013328 ALYREF ENSNFUG00015019366 alyref ENSLACG00000005694 ALYREF	Compare expression
Bilateria	46 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Drosophila melanogaster (fruit fly) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Cavia porcellus (guinea pig) Gallus gallus (chicken) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Xenopus laevis (African clawed frog) Xenopus tropicalis (western clawed frog) Anolis carolinensis (green anole) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Latimeria chalumnae (Coelacanth) Drosophila pseudoobscura () Drosophila simulans ()	51 genes ENSG00000183684 ALYREF ENSMUSG00000025134 Alyref ENSDARG00000077732 alyref FBgn0010774 Ref1 ENSCAFG00000005877 ALYREF ENSFCAG00000022549 ALYREF ENSECAG00000018754 ALYREF ENSSSCG00000032655 ALYREF ENSBTAG00000008498 ALYREF ENSCHIG00000017396 ALYREF ENSOARG00000017932 ALYREF ENSCPOG00000013710 ALYREF ENSGALG00000007237 ALYREF ENSOANG00000043693 ALYREF ENSCJAG00000039942 ALYREF ENSCATG00000033169 ALYREF ENSMFAG00000001394 ALYREF ENSMMUG00000012884 ALYREF ENSMNEG00000043666 ALYREF ENSPANG00000019265 ALYREF ENSGGOG00000013935 ALYREF ENSPPAG00000036403 ENSPTRG00000009774 ALYREF ENSMICG00000017403 ALYREF ENSCSAG00000002216 ALYREF 108395247 ALYREF ENSRNOG00000036687 Alyref ENSMODG00000003030 ALYREF 444644 alyref-b 734364 alyref-a ENSXETG00000005391 alyref ENSACAG00000010526 ALYREF ENSLOCG00000013879 alyref 118216059 alyref 118219637 LOC118219637 ENSAMXG00000007359 alyref ENSELUG00000017178 alyref ENSSSAG00000001371 THOC4 ENSSSAG00000001470 THOC4 ENSSSAG00000002667 alyref ENSSSAG00000003536 ALYREF ENSGMOG00000009882 alyref ENSPREG00000015795 alyref ENSACLG00000008432 alyref ENSNBRG00000001747 alyref ENSSMAG00000009283 alyref ENSGACG00000013328 ALYREF ENSNFUG00015019366 alyref ENSLACG00000005694 ALYREF FBgn0070763 Dpse\GA10707 FBgn0191006 Dsim\GD19510	Compare expression

Showing 1 to 10 of 10 entries

Orthology information comes from OMA : ENSORLG00000012331.

Paralogs (same species)

Filter:

Taxon Name	Gene(s)	Expression comparison	See details
Bilateria	1 gene ENSORLG00000001620 LOC101175372	Compare expression: table \| graph
Opisthokonta	149 genes ENSORLG00000000043 LOC101156553 ENSORLG00000000045 LOC101158337 ENSORLG00000000087 LOC101172398 ENSORLG00000000181 cdk11b ENSORLG00000000292 SRSF3 ENSORLG00000000294 kctd9b ENSORLG00000000393 mapk13 ENSORLG00000000746 srsf7a ENSORLG00000001003 smc1b ENSORLG00000001246 si:ch211-220i18.4 ENSORLG00000001255 LOC101157382 ENSORLG00000001562 pak2b ENSORLG00000001620 LOC101175372 ENSORLG00000001860 pak1 ENSORLG00000002370 mapk8b ENSORLG00000002439 tcerg1a ENSORLG00000002482 sass6 ENSORLG00000002502 ENKD1 ENSORLG00000002529 LOC101155125 ENSORLG00000002541 lrrc40 ENSORLG00000002556 LOC101165012 ENSORLG00000002625 SRPK2 ENSORLG00000002741 lrrc34 ENSORLG00000002789 limk1b ENSORLG00000003062 sf3b4 ENSORLG00000003093 cog6 ENSORLG00000003477 fbxl20 ENSORLG00000003530 srsf6a ENSORLG00000003659 eci2 ENSORLG00000003763 stk16 ENSORLG00000003894 LOC101175076 ENSORLG00000004052 LOC101168382 ENSORLG00000004090 cdk6 ENSORLG00000004110 LOC101163228 ENSORLG00000004217 ELAVL2 ENSORLG00000004319 col1a2 ENSORLG00000004397 fip1l1b ENSORLG00000004645 LOC101156769 ENSORLG00000004740 plk2b ENSORLG00000004928 CCDC112 ENSORLG00000005071 dnajc9 ENSORLG00000005102 col2a1a ENSORLG00000005162 mapk9 ENSORLG00000005379 elavl3 ENSORLG00000005624 RAD23B ENSORLG00000005653 prc1a ENSORLG00000005982 cnot3b ENSORLG00000006276 mapk10 ENSORLG00000006404 cux1b ENSORLG00000006445 srpk1a ENSORLG00000006477 mapk14a ENSORLG00000006835 limk2 ENSORLG00000007006 PAK3 ENSORLG00000007055 ncl ENSORLG00000007102 gsk3aa ENSORLG00000007319 ankrd28b ENSORLG00000007360 smc1al ENSORLG00000007786 tln2b ENSORLG00000007848 limk1a ENSORLG00000008001 LOC101174914 ENSORLG00000008033 rnps1 ENSORLG00000008117 luc7l ENSORLG00000008118 si:ch211-257p13.3 ENSORLG00000008496 rps6kal ENSORLG00000008553 mns1 ENSORLG00000008665 rps6ka5 ENSORLG00000008836 cdk7 ENSORLG00000008884 MAPK8 ENSORLG00000008885 cdk8 ENSORLG00000008944 mapk11 ENSORLG00000009012 mapk12b ENSORLG00000009059 LOC101169880 ENSORLG00000009092 cdkl1 ENSORLG00000009168 echs1 ENSORLG00000009268 srsf5a ENSORLG00000009383 syvn1 ENSORLG00000009603 PLK1 ENSORLG00000009636 rbm28 ENSORLG00000009979 LOC101163402 ENSORLG00000009994 LOC101161250 ENSORLG00000010141 ints6 ENSORLG00000010347 alg6 ENSORLG00000010487 cwf19l2 ENSORLG00000010648 luc7l3 ENSORLG00000010761 slirp ENSORLG00000010983 sfswap ENSORLG00000010986 itgbl1 ENSORLG00000010987 cenpf ENSORLG00000011174 cnot3a ENSORLG00000011273 col1a1b ENSORLG00000011797 fbxl2 ENSORLG00000011875 ENSORLG00000011993 mapk3 ENSORLG00000012132 zyx ENSORLG00000012272 tln2a ENSORLG00000012363 LOC101169249 ENSORLG00000012435 elavl1a ENSORLG00000012738 col2a1a ENSORLG00000012762 MOK ENSORLG00000013042 tln1 ENSORLG00000013148 cfap45 ENSORLG00000013183 ENSORLG00000013330 gsk3ab ENSORLG00000013780 tra2a ENSORLG00000013798 tial1 ENSORLG00000014142 wasa ENSORLG00000014212 LOC101159187 ENSORLG00000014240 kctd9a ENSORLG00000014406 rps6ka1 ENSORLG00000014658 col5a2a ENSORLG00000014666 LOC101169196 ENSORLG00000014972 cdk2 ENSORLG00000015209 cdk4 ENSORLG00000015247 cdk19 ENSORLG00000015325 shoc2 ENSORLG00000015433 cirbpb ENSORLG00000015438 ankrd52a ENSORLG00000015602 lpp ENSORLG00000015642 LOC101158614 ENSORLG00000015754 dyrk3 ENSORLG00000015915 si:dkey-21a6.5 ENSORLG00000015955 sf3b6 ENSORLG00000016119 srpk1b ENSORLG00000016122 mapk14b ENSORLG00000016212 plk3 ENSORLG00000016296 mapk12a ENSORLG00000016479 ppp1r7 ENSORLG00000016554 tra2b ENSORLG00000016606 rad23aa ENSORLG00000016666 prpf40a ENSORLG00000016961 cdk20 ENSORLG00000017013 col1 ENSORLG00000017099 ECHDC3 ENSORLG00000017111 celf2 ENSORLG00000017175 ccdc173 ENSORLG00000017496 CIR1 ENSORLG00000017539 cdk5 ENSORLG00000017561 hnrnpa3 ENSORLG00000017950 gsk3ba ENSORLG00000018034 ENSORLG00000018072 sel1l ENSORLG00000018273 cdk9 ENSORLG00000018612 cfdp1 ENSORLG00000018802 zgc:171775 ENSORLG00000019266 cdk1 ENSORLG00000019973 mfap1 ENSORLG00000020054 srsf3a ENSORLG00000020076 SRPK3 ENSORLG00000020827 dek	Compare expression: table \| graph

Showing 1 to 2 of 2 entries

Paralogy information comes from OMA : ENSORLG00000012331.

Cross-references

Ensembl

ENSORLG00000012331 (ALYREF)

HGNC

HGNC:19071 (ALYREF)

UniProtKB/TrEMBL

A0A3B3I5A6,A0A3B3I5A6_ORYLA,H2MA86,H2MA86_ORYLA