Anguilla anguilla

Gene : LOC118206453 - 118206453 - Anguilla anguilla (European freshwater eel)

General information

Gene identifier

118206453

Name

LOC118206453

Description

Synonym(s)

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000160intestine76.701.39e-4See source data
RSCAIE
UBERON:0000955brain59.727.64e-4See source data
RSCAIE
UBERON:0001474bone element55.040.002See source data
RSCAIE
UBERON:0000473testis39.110.005See source data
RSCAIE
UBERON:0007021sexually immature organism25.910.03See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000948heart16.490.601See source data
RSCAIE
UBERON:0000206pharyngeal gill19.330.233See source data
RSCAIE
UBERON:0000992ovary20.970.25See source data
RSCAIE
UBERON:0002385muscle tissue27.610.164See source data
RSCAIE
UBERON:0006860swim bladder27.740.349See source data
RSCAIE
UBERON:0002107liver28.600.467See source data
RSCAIE
UBERON:0000080mesonephros43.640.202See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Teleostei

7 species

Danio rerio (zebrafish)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Scophthalmus maximus (Turbot)
Compare expression
Neopterygii

8 species

Danio rerio (zebrafish)
Lepisosteus oculatus (Spotted gar)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Scophthalmus maximus (Turbot)
Compare expression
Euteleostomi

37 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Scophthalmus maximus (Turbot)

37 genes

Compare expression
Chordata

38 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Scophthalmus maximus (Turbot)
Branchiostoma lanceolatum (Common lancelet)

38 genes

Compare expression
Bilateria

42 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Drosophila melanogaster (fruit fly)

Caenorhabditis elegans (nematode)

Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Scophthalmus maximus (Turbot)
Branchiostoma lanceolatum (Common lancelet)
Drosophila pseudoobscura ()

Drosophila simulans ()

45 genes

Compare expression

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Vertebrata

1 gene

118217655 slc18a2
Compare expression
Deuterostomia

3 genes

118217566 LOC118217566
118217655 slc18a2
118219846 slc18a3a
Compare expression
Opisthokonta

13 genes

118209238 slc37a4a
118210448 LOC118210448
118216716 spns1
118217394 slc17a7a
118217566 LOC118217566
118217655 slc18a2
118219846 slc18a3a
118221568 LOC118221568
118227995 LOC118227995
118231205 slc17a8
118235111 spns3
118235115 LOC118235115
118235701 spns2
Compare expression

Cross-references

RefSeq

LOC118206453 (LOC118206453)