Anguilla anguilla

Gene : LOC118208664 - 118208664 - Anguilla anguilla (European freshwater eel)

General information

Gene identifier

118208664

Name

LOC118208664

Description

Synonym(s)

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000955brain98.734.75e-9See source data
RSCAIE
UBERON:0007021sexually immature organism89.702.81e-7See source data
RSCAIE
UBERON:0002385muscle tissue39.700.031See source data
RSCAIE
UBERON:0000473testis38.940.005See source data
RSCAIE
UBERON:0001474bone element34.700.027See source data
RSCAIE
UBERON:0000992ovary34.240.047See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000080mesonephros11.421See source data
RSCAIE
UBERON:0002107liver12.571See source data
RSCAIE
UBERON:0006860swim bladder16.611See source data
RSCAIE
UBERON:0000206pharyngeal gill19.570.224See source data
RSCAIE
UBERON:0000160intestine24.560.271See source data
RSCAIE
UBERON:0000948heart31.540.089See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Teleostei

3 species

Danio rerio (zebrafish)


Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Compare expression
Euteleostomi

31 species

Homo sapiens (human)

Mus musculus (mouse)


Danio rerio (zebrafish)


Canis lupus familiaris (dog)

Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)

Capra hircus (Goat)

Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)


Gallus gallus (chicken)


Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Cercocebus atys (Sooty mangabey)

Macaca fascicularis (Crab-eating macaque)

Macaca mulatta (macaque)

Macaca nemestrina (Pig-tailed macaque)

Gorilla gorilla (gorilla)

Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)

Chlorocebus sabaeus (Green monkey)


Manis javanica (Malayan pangolin)

Rattus norvegicus (rat)

Monodelphis domestica (opossum)

Xenopus laevis (African clawed frog)





Xenopus tropicalis (western clawed frog)

Anolis carolinensis (green anole)

Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Latimeria chalumnae (Coelacanth)

63 genes

ENSG00000123416 TUBA1B
ENSG00000167552 TUBA1A
ENSMUSG00000023004 Tuba1b
ENSMUSG00000043091 Tuba1c
ENSMUSG00000072235 Tuba1a
ENSDARG00000001889 tuba1a
ENSDARG00000045014 tuba2
ENSDARG00000055216 tuba1c
ENSCAFG00000008640 TUBA1B
ENSCAFG00000008661 LOC100856405
ENSFCAG00000038056 TUBA1A
ENSECAG00000030778 TUBA1A
ENSSSCG00000000190 TUBA1B
ENSBTAG00000001489 TUBA1A
ENSBTAG00000012244 TUBA1B
ENSCHIG00000018025 TUBA1B
ENSCHIG00000022988 TUBA1A
ENSOARG00000018884 TUBA1B
ENSOCUG00000004082
ENSOCUG00000026994 TUBA4A
ENSOCUG00000027812
ENSGALG00000037953 TUBA1A
ENSGALG00000040260 TUBA1C
ENSGALG00000052192 TUBA1B
ENSMGAG00000011344
ENSOANG00000047868 TUBA1B
ENSCATG00000031924 TUBA1C
ENSCATG00000038328 TUBA1B
ENSMFAG00000035643 TUBA1C
ENSMFAG00000042144 TUBA1A
ENSMMUG00000009788 TUBA1C
ENSMMUG00000021081 TUBA1B
ENSMNEG00000000827 TUBA1C
ENSMNEG00000031206 TUBA1A
ENSGGOG00000005381 TUBA1A
ENSGGOG00000028554 TUBA1B
ENSPPAG00000042451 TUBA1B
ENSPTRG00000004901 TUBA1A
ENSPTRG00000045808 TUBA1B
ENSCSAG00000006152 TUBA1C
ENSCSAG00000006153 TUBA1A
ENSCSAG00000006157 TUBA1B
108383375 LOC108383375
108393018 LOC108393018
ENSRNOG00000021438 Tuba1c
ENSRNOG00000053468 Tuba1b
ENSMODG00000014329 LOC100010481
ENSMODG00000017612 TUBA1B
100337592 tuba
108708550 tuba1b.L
108708551 tuba1a.L
108709821 tuba1b.S
108709822 tuba1a.S
380482 tuba1c.S
ENSXETG00000011185 tubal3.1
ENSXETG00000011187 tuba1c
ENSACAG00000013417 LOC100563259
ENSACAG00000015652 TUBA1A
ENSELUG00000006694
ENSSSAG00000039709 LOC106567090
ENSSSAG00000054293 TUBA1C
ENSLACG00000018974 TUBA1B
ENSLACG00000018978 tuba1b
Compare expression
Bilateria

32 species

Homo sapiens (human)

Mus musculus (mouse)


Danio rerio (zebrafish)


Caenorhabditis elegans (nematode)
Canis lupus familiaris (dog)

Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)

Capra hircus (Goat)

Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)


Gallus gallus (chicken)


Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Cercocebus atys (Sooty mangabey)

Macaca fascicularis (Crab-eating macaque)

Macaca mulatta (macaque)

Macaca nemestrina (Pig-tailed macaque)

Gorilla gorilla (gorilla)

Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)

Chlorocebus sabaeus (Green monkey)


Manis javanica (Malayan pangolin)

Rattus norvegicus (rat)

Monodelphis domestica (opossum)

Xenopus laevis (African clawed frog)





Xenopus tropicalis (western clawed frog)

Anolis carolinensis (green anole)

Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Latimeria chalumnae (Coelacanth)

64 genes

ENSG00000123416 TUBA1B
ENSG00000167552 TUBA1A
ENSMUSG00000023004 Tuba1b
ENSMUSG00000043091 Tuba1c
ENSMUSG00000072235 Tuba1a
ENSDARG00000001889 tuba1a
ENSDARG00000045014 tuba2
ENSDARG00000055216 tuba1c
WBGene00003175 mec-12
ENSCAFG00000008640 TUBA1B
ENSCAFG00000008661 LOC100856405
ENSFCAG00000038056 TUBA1A
ENSECAG00000030778 TUBA1A
ENSSSCG00000000190 TUBA1B
ENSBTAG00000001489 TUBA1A
ENSBTAG00000012244 TUBA1B
ENSCHIG00000018025 TUBA1B
ENSCHIG00000022988 TUBA1A
ENSOARG00000018884 TUBA1B
ENSOCUG00000004082
ENSOCUG00000026994 TUBA4A
ENSOCUG00000027812
ENSGALG00000037953 TUBA1A
ENSGALG00000040260 TUBA1C
ENSGALG00000052192 TUBA1B
ENSMGAG00000011344
ENSOANG00000047868 TUBA1B
ENSCATG00000031924 TUBA1C
ENSCATG00000038328 TUBA1B
ENSMFAG00000035643 TUBA1C
ENSMFAG00000042144 TUBA1A
ENSMMUG00000009788 TUBA1C
ENSMMUG00000021081 TUBA1B
ENSMNEG00000000827 TUBA1C
ENSMNEG00000031206 TUBA1A
ENSGGOG00000005381 TUBA1A
ENSGGOG00000028554 TUBA1B
ENSPPAG00000042451 TUBA1B
ENSPTRG00000004901 TUBA1A
ENSPTRG00000045808 TUBA1B
ENSCSAG00000006152 TUBA1C
ENSCSAG00000006153 TUBA1A
ENSCSAG00000006157 TUBA1B
108383375 LOC108383375
108393018 LOC108393018
ENSRNOG00000021438 Tuba1c
ENSRNOG00000053468 Tuba1b
ENSMODG00000014329 LOC100010481
ENSMODG00000017612 TUBA1B
100337592 tuba
108708550 tuba1b.L
108708551 tuba1a.L
108709821 tuba1b.S
108709822 tuba1a.S
380482 tuba1c.S
ENSXETG00000011185 tubal3.1
ENSXETG00000011187 tuba1c
ENSACAG00000013417 LOC100563259
ENSACAG00000015652 TUBA1A
ENSELUG00000006694
ENSSSAG00000039709 LOC106567090
ENSSSAG00000054293 TUBA1C
ENSLACG00000018974 TUBA1B
ENSLACG00000018978 tuba1b
Compare expression

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Anguilla

4 genes

118208082 LOC118208082
118208083 LOC118208083
118208660 tuba1a
118210593 tuba2
Compare expression
Eumetazoa

14 genes

118208082 LOC118208082
118208083 LOC118208083
118208214 tuba5
118208660 tuba1a
118210593 tuba2
118211835 LOC118211835
118213845 LOC118213845
118213846 LOC118213846
118213847 LOC118213847
118213848 LOC118213848
118221918 LOC118221918
118222970 LOC118222970
118222971 LOC118222971
118234135 LOC118234135
Compare expression
Opisthokonta

16 genes

118208082 LOC118208082
118208083 LOC118208083
118208214 tuba5
118208660 tuba1a
118210593 tuba2
118211835 LOC118211835
118213845 LOC118213845
118213846 LOC118213846
118213847 LOC118213847
118213848 LOC118213848
118218267 LOC118218267
118221918 LOC118221918
118221923 LOC118221923
118222970 LOC118222970
118222971 LOC118222971
118234135 LOC118234135
Compare expression

Cross-references

RefSeq

LOC118208664 (LOC118208664)