Xenopus laevis

Gene : myo1c-a - 398934 - Xenopus laevis (African clawed frog)

General information

Gene identifier

398934

Name

myo1c-a

Description

Unconventional myosin-Ic-A

Synonym(s)

MMI-beta-A,nm1,MMIb-A,mmib,myo1c,myo1c-b,myr2

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
CL:0000025egg cell90.371.89e-10See source data
RSCAIE
UBERON:0004734gastrula87.872.49e-9See source data
RSCAIE
UBERON:0000307blastula87.679.06e-10See source data
RSCAIE
UBERON:0001264pancreas86.733.28e-8See source data
RSCAIE
UBERON:0000948heart85.619.58e-8See source data
RSCAIE
UBERON:0000160intestine82.402.14e-8See source data
RSCAIE
UBERON:0000014zone of skin81.904.54e-7See source data
RSCAIE
UBERON:0002048lung80.285.01e-7See source data
RSCAIE
UBERON:0000945stomach78.652.12e-7See source data
RSCAIE
UBERON:0001846internal ear74.311.11e-5See source data
RSCAIE
UBERON:0000473testis73.729.63e-8See source data
RSCAIE
CL:0000023oocyte72.471.31e-6See source data
RSCAIE
UBERON:0002385muscle tissue71.942.76e-5See source data
RSCAIE
UBERON:0002113kidney71.795.99e-7See source data
RSCAIE
UBERON:0002107liver71.695.91e-7See source data
RSCAIE
UBERON:0002106spleen70.527.15e-6See source data
RSCAIE
UBERON:0000019camera-type eye67.581.27e-6See source data
RSCAIE
UBERON:0000992ovary66.753.38e-10See source data
RSCAIE
UBERON:0004455neurula embryo62.208.61e-5See source data
RSCAIE
UBERON:0000955brain50.593.09e-4See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

No reported absence of expression for this gene

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Xenopus

1 species

Xenopus tropicalis (western clawed frog)

1 gene

Compare expression
Tetrapoda

29 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus tropicalis (western clawed frog)
Compare expression
Sarcopterygii

30 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus tropicalis (western clawed frog)
Latimeria chalumnae (Coelacanth)
Compare expression
Euteleostomi

43 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus tropicalis (western clawed frog)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Latimeria chalumnae (Coelacanth)

44 genes

Compare expression
Bilateria

45 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Drosophila melanogaster (fruit fly)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus tropicalis (western clawed frog)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Latimeria chalumnae (Coelacanth)
Drosophila pseudoobscura ()

46 genes

Compare expression

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Xenopus

1 gene

398527 myo1c.L
Compare expression
Chordata

3 genes

108705061 LOC108705061
108715622 LOC108715622
398527 myo1c.L
Compare expression
Bilateria

5 genes

108705061 LOC108705061
108709850 myo1a.S
108715622 LOC108715622
398527 myo1c.L
431950 myo1a.L
Compare expression
Metazoa

7 genes

108702550 LOC108702550
108705061 LOC108705061
108709850 myo1a.S
108715622 LOC108715622
398527 myo1c.L
398749 myo1d
431950 myo1a.L
Compare expression
Opisthokonta

13 genes

100158409 myo1e.1.L
108702550 LOC108702550
108705061 LOC108705061
108706866 myo1f.S
108709850 myo1a.S
108712943 LOC108712943
108715622 LOC108715622
380131 myo1e.2.L
398527 myo1c.L
398749 myo1d
431950 myo1a.L
444470 myo1f.L
734396 myo19
Compare expression

Cross-references