Bos taurus

Gene : LDHD - ENSBTAG00000006779 - Bos taurus (cattle)

General information

Gene identifier

ENSBTAG00000006779

Name

LDHD

Description

lactate dehydrogenase D [Source:VGNC Symbol;Acc:VGNC:30825]

Synonym(s)

Orthologs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0001225cortex of kidney97.36<= 1.00e-14See source data
RSCAIE
UBERON:0010533metanephros cortex97.26<= 1.00e-14See source data
RSCAIE
UBERON:0000082adult mammalian kidney92.429.73e-14See source data
RSCAIE
UBERON:0000362renal medulla88.982.42e-14See source data
RSCAIE
UBERON:0001000vas deferens87.454.96e-7See source data
RSCAIE
UBERON:0000378tongue muscle85.844.73e-10See source data
RSCAIE
UBERON:0002512corpus luteum85.007.13e-11See source data
RSCAIE
UBERON:0001739laryngeal cartilage83.744.59e-10See source data
RSCAIE
UBERON:0001371gluteus medius83.154.42e-10See source data
RSCAIE
UBERON:0002383supraspinatus muscle79.831.01e-8See source data
RSCAIE
UBERON:0001378rectus femoris78.525.15e-9See source data
RSCAIE
UBERON:0001374biceps femoris78.462.11e-5See source data
RSCAIE
UBERON:0001509triceps brachii75.763.97e-7See source data
RSCAIE
UBERON:0001477infraspinatus muscle75.471.42e-8See source data
RSCAIE
UBERON:0002082cardiac ventricle75.223.04e-9See source data
RSCAIE
UBERON:0001886choroid plexus75.021.45e-4See source data
RSCAIE
UBERON:0001381semimembranosus muscle74.729.07e-8See source data
RSCAIE
UBERON:0002107liver74.552.85e-9See source data
RSCAIE
UBERON:0001401longissimus thoracis muscle73.172.01e-11See source data
RSCAIE
UBERON:0000057urethra72.455.17e-9See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
CL:0000023oocyte27.001See source data
RSCAIE
UBERON:0001732pharyngeal tonsil30.050.334See source data
RSCAIE
UBERON:0015869retropharyngeal lymph node31.010.48See source data
RSCAIE
CL:0000738leukocyte31.111See source data
RSCAIE
CL:0000576monocyte31.411See source data
RSCAIE
UBERON:0000178blood32.110.904See source data
RSCAIE
UBERON:0001103diaphragm33.990.143See source data
RSCAIE
UBERON:0001968semen34.201See source data
RSCAIE
UBERON:0002509mesenteric lymph node34.620.625See source data
RSCAIE
UBERON:0001043esophagus39.800.058See source data
RSCAIE
CL:0000775neutrophil40.720.654See source data
RSCAIE
UBERON:0002367prostate gland42.330.292See source data
RSCAIE
CL:0000501granulosa cell44.910.149See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Bovidae

2 species

Capra hircus (Goat)
Ovis aries (Sheep)
Compare expression
Artiodactyla

3 species

Compare expression
Laurasiatheria

7 species

Compare expression
Boreoeutheria

22 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Compare expression
Theria

23 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Compare expression
Mammalia

24 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Compare expression
Tetrapoda

26 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)
Xenopus tropicalis (western clawed frog)
Compare expression
Sarcopterygii

27 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)
Xenopus tropicalis (western clawed frog)
Latimeria chalumnae (Coelacanth)
Compare expression
Euteleostomi

39 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)
Xenopus tropicalis (western clawed frog)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Latimeria chalumnae (Coelacanth)

39 genes

Compare expression
Bilateria

40 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Caenorhabditis elegans (nematode)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)
Xenopus tropicalis (western clawed frog)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Latimeria chalumnae (Coelacanth)

40 genes

Compare expression
Orthology information comes from OMA : ENSBTAG00000006779.

Cross-references

Ensembl

UniProtKB/TrEMBL

VGNC

VGNC:30825 (LDHD)