Gene : SOX2 - ENSCSAG00000018883 - Chlorocebus sabaeus (Green monkey)
General information
Gene identifier
ENSCSAG00000018883
Name
SOX2
Description
SRY-box transcription factor 2 [Source:NCBI gene (formerly Entrezgene);Acc:103221186]
Synonym(s)
Orthologs
Expression
Show
entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| UBERON:0001873caudate nucleus | 91.93 | 1.80e-7 | See source data | |
| UBERON:0001954Ammon's horn | 90.39 | 5.52e-7 | See source data | |
| UBERON:0000451prefrontal cortex | 89.64 | 8.26e-7 | See source data | |
| UBERON:0000007pituitary gland | 82.73 | 2.34e-8 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Reported absence of expression
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entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| UBERON:0002107liver | 27.37 | 0.917 | See source data | |
| CL:0000057fibroblast | 29.28 | 1 | See source data | |
| UBERON:0001235adrenal cortex | 33.52 | 0.085 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Orthologs
Taxon Name | Species with orthologs | Gene(s) | Expression comparison | See details |
|---|---|---|---|---|
| Cercopithecinae | 3 species | 3 genes | Compare expression | |
| Catarrhini | 6 species | 6 genes | Compare expression | |
| Simiiformes | 7 species | 7 genes | Compare expression | |
| Euarchontoglires | 10 species | 10 genes | Compare expression | |
| Boreoeutheria | 14 species | 14 genes | Compare expression | |
| Amniota | 15 species | 15 genes | Compare expression | |
| Tetrapoda | 16 species | 16 genes | Compare expression | |
| Sarcopterygii | 17 species | 17 genes | Compare expression | |
| Euteleostomi | 30 species | 31 genes | Compare expression |
Cross-references
Ensembl
HGNC
EMBL
UniProtKB/TrEMBL