Ovis aries

Gene : SOX2 - ENSOARG00000014598 - Ovis aries (Sheep)

General information

Gene identifier

ENSOARG00000014598

Name

SOX2

Description

SRY-box transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11195]

Synonym(s)

Orthologs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0007362omasum90.003.05e-12See source data
RSCAIE
UBERON:0007365rumen88.845.28e-12See source data
RSCAIE
UBERON:0002037cerebellum77.903.85e-8See source data
RSCAIE
UBERON:0007361ruminant reticulum67.335.13e-11See source data
RSCAIE
UBERON:0002048lung66.023.30e-9See source data
RSCAIE
UBERON:0000007pituitary gland62.752.46e-9See source data
RSCAIE
UBERON:0000922embryo60.159.09e-5See source data
RSCAIE
UBERON:0007358abomasum59.481.50e-7See source data
RSCAIE
UBERON:0001166pylorus54.785.20e-7See source data
RSCAIE
UBERON:0002421hippocampal formation52.571.75e-6See source data
RSCAIE
UBERON:0002372tonsil52.321.48e-6See source data
RSCAIE
UBERON:0035216thoracic part of esophagus45.252.74e-10See source data
RSCAIE
UBERON:0002134tricuspid valve37.591.35e-4See source data
RSCAIE
UBERON:0002135mitral valve37.440.001See source data
RSCAIE
UBERON:0002137aortic valve36.027.35e-4See source data
RSCAIE
UBERON:0002046thyroid gland34.796.13e-5See source data
RSCAIE
UBERON:0003889fallopian tube33.710.004See source data
RSCAIE
UBERON:0004716conceptus28.273.22e-4See source data
RSCAIE
UBERON:0001236adrenal medulla26.670.032See source data
RSCAIE
UBERON:0010239spiral colon22.850.011See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0002370thymus5.171See source data
RSCAIE
UBERON:0000473testis6.751See source data
RSCAIE
UBERON:0001829major salivary gland9.191See source data
RSCAIE
UBERON:0000995uterus9.801See source data
RSCAIE
UBERON:0002520submandibular lymph node11.231See source data
RSCAIE
UBERON:0002116ileum11.651See source data
RSCAIE
UBERON:0001543popliteal lymph node11.721See source data
RSCAIE
UBERON:0016378ileocolic lymph node11.881See source data
RSCAIE
UBERON:0002509mesenteric lymph node11.921See source data
RSCAIE
UBERON:0001301epididymis12.181See source data
RSCAIE
UBERON:0004502skeletal muscle tissue of biceps brachii12.491See source data
RSCAIE
UBERON:0000082adult mammalian kidney12.621See source data
RSCAIE
UBERON:0016382prescapular lymph node12.781See source data
RSCAIE
UBERON:0017258placentome of cotyledonary placenta13.191See source data
RSCAIE
UBERON:0010533metanephros cortex13.391See source data
RSCAIE
UBERON:0009780cardiac muscle tissue of left auricle13.831See source data
RSCAIE
UBERON:0001911mammary gland14.330.413See source data
RSCAIE
UBERON:0017259placental caruncle14.670.675See source data
RSCAIE
CL:0000738leukocyte14.771See source data
RSCAIE
UBERON:0013119haemal node15.041See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Caprinae

1 species

Compare expression
Laurasiatheria

3 species

Equus caballus (horse)
Capra hircus (Goat)
Manis javanica (Malayan pangolin)
Compare expression
Boreoeutheria

14 species

Homo sapiens (human)
Mus musculus (mouse)
Equus caballus (horse)
Capra hircus (Goat)
Oryctolagus cuniculus (rabbit)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca nemestrina (Pig-tailed macaque)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Compare expression
Amniota

15 species

Homo sapiens (human)
Mus musculus (mouse)
Equus caballus (horse)
Capra hircus (Goat)
Oryctolagus cuniculus (rabbit)
Gallus gallus (chicken)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca nemestrina (Pig-tailed macaque)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Compare expression
Tetrapoda

16 species

Homo sapiens (human)
Mus musculus (mouse)
Equus caballus (horse)
Capra hircus (Goat)
Oryctolagus cuniculus (rabbit)
Gallus gallus (chicken)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca nemestrina (Pig-tailed macaque)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Xenopus tropicalis (western clawed frog)
Compare expression
Sarcopterygii

17 species

Homo sapiens (human)
Mus musculus (mouse)
Equus caballus (horse)
Capra hircus (Goat)
Oryctolagus cuniculus (rabbit)
Gallus gallus (chicken)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca nemestrina (Pig-tailed macaque)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Xenopus tropicalis (western clawed frog)
Latimeria chalumnae (Coelacanth)
Compare expression
Euteleostomi

30 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Equus caballus (horse)
Capra hircus (Goat)
Oryctolagus cuniculus (rabbit)
Gallus gallus (chicken)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca nemestrina (Pig-tailed macaque)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Xenopus tropicalis (western clawed frog)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)

Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Latimeria chalumnae (Coelacanth)
Compare expression
Orthology information comes from OMA : ENSOARG00000014598.

Cross-references

Ensembl

HGNC

HGNC:11195 (SOX2)

UniProtKB/TrEMBL